Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 ATP1B1P1-201ENST00000509767 915 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC093281.2-201ENST00000510153 597 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 LTV1P1-201ENST00000510683 1237 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 RNU6-885P-201ENST00000516607 104 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC106038.2-201ENST00000520706 568 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC022880.1-201ENST00000534017 973 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC008759.1-201ENST00000589783 983 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC112220.3-201ENST00000605502 502 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC104073.3-201ENST00000610942 955 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AL031667.3-201ENST00000620124 655 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC091953.3-201ENST00000623220 236 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AC124312.6-202ENST00000623624 418 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 CDRT1-208ENST00000630868 794 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 ASNSP1-204ENST00000641977 1664 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 MTND4P34-201ENST00000572715 1371 ntBASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.12□□□□□ -1.75
CLIP4Q8N3C7 AP000756.2-201ENST00000624168 2567 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 RNU6-582P-201ENST00000362989 107 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 U3.4-201ENST00000363352 213 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 RNA5SP22-201ENST00000365393 109 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 SNORA51.12-201ENST00000384448 134 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 MIR550A3-201ENST00000390735 95 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 RNA5SP397-201ENST00000391323 118 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 SDHCP2-201ENST00000398565 501 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AL078604.1-201ENST00000404609 466 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 ZNF603P-201ENST00000405613 487 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AC009302.1-201ENST00000417147 390 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AL360081.1-201ENST00000428299 555 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 MED14P1-201ENST00000430517 648 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AL049745.1-201ENST00000433953 286 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 MTND1P30-201ENST00000441241 901 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 MTCO1P19-201ENST00000443487 500 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 MTCO3P11-201ENST00000455103 774 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AC010307.1-201ENST00000467206 836 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 RN7SL809P-201ENST00000482040 297 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AC083982.1-201ENST00000485679 344 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 RPS26P15-201ENST00000488067 348 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 MTATP6P22-201ENST00000507369 598 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 NPM1P6-201ENST00000521088 871 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 OR5AK1P-201ENST00000524837 922 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AP001189.2-201ENST00000527320 189 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AP001781.1-201ENST00000530977 207 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 VN1R84P-201ENST00000593697 235 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 U73023.1-201ENST00000603134 700 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AL355816.1-201ENST00000607951 118 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AL391497.1-201ENST00000608671 547 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AC005962.2-201ENST00000611427 652 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AC005332.6-201ENST00000613178 446 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AC009878.1-201ENST00000621819 340 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AC007546.2-201ENST00000623996 360 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 CR392039.4-201ENST00000624968 501 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 AC006065.6-201ENST00000625201 545 ntBASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.11□□□□□ -1.75
CLIP4Q8N3C7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms