Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 Y_RNA.188-201ENST00000363952 111 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RNF43Q68DV7 RNU6-769P-201ENST00000384407 104 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 RNU6-1297P-201ENST00000384415 104 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 RNU4-70P-201ENST00000384579 139 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 MIR320C1-201ENST00000408566 88 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 AL136133.1-201ENST00000413694 376 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 PMCHL1-202ENST00000423102 261 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RNF43Q68DV7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.87□□□□□ -1.47
RNF43Q68DV7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.87□□□□□ -1.47
RNF43Q68DV7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.87□□□□□ -1.47
RNF43Q68DV7 OR7E116P-201ENST00000448529 957 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 PPP1R2P5-201ENST00000457256 603 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 PSMC1P13-201ENST00000458195 985 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 UBA52P7-201ENST00000486088 380 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 GAPDHP56-201ENST00000506031 988 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 HIGD1AP14-201ENST00000507617 282 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.87□□□□□ -1.47
RNF43Q68DV7 HMGB1P23-201ENST00000518743 568 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 AC063950.1-201ENST00000552036 308 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 AL359219.2-201ENST00000555184 348 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.87□□□□□ -1.47
RNF43Q68DV7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.87□□□□□ -1.47
RNF43Q68DV7 AC026464.5-201ENST00000562497 722 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.87□□□□□ -1.47
RNF43Q68DV7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.87□□□□□ -1.47
RNF43Q68DV7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.87□□□□□ -1.47
RNF43Q68DV7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RNF43Q68DV7 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.87□□□□□ -1.47
RNF43Q68DV7 RNU6-87P-201ENST00000607561 108 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 MAPK10-328ENST00000641553 4009 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 AC092447.10-201ENST00000620607 1652 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 MRE11P1-201ENST00000464884 2127 ntBASIC5.87□□□□□ -1.47
RNF43Q68DV7 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RNF43Q68DV7 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RNF43Q68DV7 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RNF43Q68DV7 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RNF43Q68DV7 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.87□□□□□ -1.47
RNF43Q68DV7 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RNF43Q68DV7 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RNF43Q68DV7 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RNF43Q68DV7 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RNF43Q68DV7 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RNF43Q68DV7 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RNF43Q68DV7 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RNF43Q68DV7 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RNF43Q68DV7 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RNF43Q68DV7 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RNF43Q68DV7 MIR1302-3-201ENST00000408128 138 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 OR10T1P-201ENST00000424327 947 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 AC012075.1-201ENST00000436549 580 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 RPL12P3-201ENST00000440080 396 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 CYCSP51-201ENST00000443545 318 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 MEMO1P4-201ENST00000453590 386 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 RN7SL72P-201ENST00000460697 269 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 AC013356.1-201ENST00000489027 564 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 HMGB3P15-201ENST00000507326 574 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 AC114797.1-201ENST00000514003 728 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 GAPDHP62-201ENST00000515313 990 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 Vault.3-201ENST00000516676 95 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 SNORD60.2-201ENST00000516883 86 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 RNU6-1271P-201ENST00000517049 105 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 AC079075.1-201ENST00000559543 878 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 AP001330.4-201ENST00000604350 154 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 Mico1.1-201ENST00000611698 204 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 AC078899.5-201ENST00000612475 178 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 U4.1-201ENST00000620349 87 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 MIR6837-201ENST00000620884 64 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 AC099654.6-201ENST00000636487 512 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 MAPK10-338ENST00000641647 3362 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
RNF43Q68DV7 LINC00561-201ENST00000565815 2738 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 SRRM1P3-201ENST00000426911 2678 ntBASIC5.86□□□□□ -1.47
RNF43Q68DV7 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RNF43Q68DV7 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RNF43Q68DV7 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms