Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 HMGB3P9-201ENST00000441799 583 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AL691482.1-201ENST00000453255 87 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 RPL7P1-201ENST00000468161 747 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 RPL7P9-201ENST00000468715 747 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AC109327.1-201ENST00000471666 403 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 SETP11-201ENST00000473027 690 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 OR7K1P-201ENST00000546439 926 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AC007954.1-201ENST00000554198 494 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AC068831.4-201ENST00000556118 109 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AGGF1P8-201ENST00000562979 1000 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AC084783.1-201ENST00000565846 910 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 MTATP6P3-201ENST00000581686 676 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 MIR3939-201ENST00000582614 106 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 RSL24D1P11-201ENST00000591045 491 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AL031985.2-201ENST00000600955 480 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AF131215.7-201ENST00000602443 707 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AC078795.2-201ENST00000602835 1252 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AC073091.2-201ENST00000603205 907 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AC069304.2-201ENST00000605154 435 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 MIR8069-1-201ENST00000616627 86 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AC092650.2-201ENST00000619984 902 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 MIR8069-2-201ENST00000621412 86 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 PCMTD1P7-201ENST00000634506 357 ntBASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC44A4Q53GD3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AC008758.3-201ENST00000507003 1829 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 RNU6-921P-201ENST00000384361 107 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 RNU6-1122P-201ENST00000384449 107 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AC006366.1-201ENST00000422002 759 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 ARPC3P2-201ENST00000457786 533 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AC108078.3-201ENST00000502633 489 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AC091868.1-201ENST00000508746 304 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 MTCYBP43-201ENST00000513621 740 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 NDUFA5P2-201ENST00000519723 344 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 SMARCE1P4-201ENST00000523647 241 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 CYCSP28-201ENST00000534284 321 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AC090515.3-201ENST00000560431 315 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AC007224.1-201ENST00000564410 144 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AC074051.3-201ENST00000570238 358 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 RN7SL652P-201ENST00000577769 300 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 RN7SL802P-201ENST00000577858 299 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 MIR5699-201ENST00000578903 90 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AC005332.10-201ENST00000612725 619 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AC009237.17-201ENST00000618111 748 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AC092656.1-203ENST00000624134 423 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AC011944.2-201ENST00000624440 683 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AL031119.1-201ENST00000404707 1879 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AL442639.1-201ENST00000625030 1899 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 XPOTP1-201ENST00000443317 2398 ntBASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC44A4Q53GD3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC44A4Q53GD3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms