Protein–RNA interactions for Protein: Q16586

SGCA, Alpha-sarcoglycan, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCAQ16586 AC067959.1-201ENST00000604334 379 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 AL390816.3-201ENST00000604527 1066 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 AL163642.2-201ENST00000604722 1019 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 SNORA62.6-201ENST00000606322 83 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 AC016877.3-201ENST00000606778 504 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 AC005344.1-201ENST00000613391 459 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 AL163051.2-201ENST00000618976 735 ntBASIC3.32□□□□□ -1.88
SGCAQ16586 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.32□□□□□ -1.88
SGCAQ16586 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SGCAQ16586 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.32□□□□□ -1.88
SGCAQ16586 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SGCAQ16586 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SGCAQ16586 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SGCAQ16586 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SGCAQ16586 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SGCAQ16586 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SGCAQ16586 AP004289.2-201ENST00000444413 1457 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 MTND4P34-201ENST00000572715 1371 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.31□□□□□ -1.88
SGCAQ16586 RNU6-543P-201ENST00000362576 108 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.31□□□□□ -1.88
SGCAQ16586 RNA5SP424-201ENST00000390988 115 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 PTGES3P2-201ENST00000407942 482 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 RPL23AP47-201ENST00000408017 460 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 AL158050.1-201ENST00000416077 457 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 MTND2P16-201ENST00000419987 799 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.31□□□□□ -1.88
SGCAQ16586 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.31□□□□□ -1.88
SGCAQ16586 DPPA2P1-201ENST00000428060 556 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 ETF1P3-201ENST00000430422 1160 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 MTCO1P43-201ENST00000431831 488 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.31□□□□□ -1.88
SGCAQ16586 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.31□□□□□ -1.88
SGCAQ16586 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.31□□□□□ -1.88
SGCAQ16586 RPS29P7-201ENST00000439662 171 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.31□□□□□ -1.88
SGCAQ16586 SETD6P1-201ENST00000444575 317 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 AC006480.1-201ENST00000449887 378 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 AC078857.1-201ENST00000469870 667 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 RPL7P5-201ENST00000471472 736 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.31□□□□□ -1.88
SGCAQ16586 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.31□□□□□ -1.88
SGCAQ16586 AC092185.1-201ENST00000491371 97 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.31□□□□□ -1.88
SGCAQ16586 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.31□□□□□ -1.88
SGCAQ16586 AC008628.1-201ENST00000508663 265 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 RN7SKP234-201ENST00000517173 224 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 HMGB1P23-201ENST00000518743 568 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 AC008562.1-201ENST00000521763 330 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 AC010198.2-201ENST00000550612 259 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 AC006960.3-201ENST00000561845 705 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 AC037471.2-201ENST00000564941 598 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.31□□□□□ -1.88
SGCAQ16586 AC106734.1-201ENST00000568646 663 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.31□□□□□ -1.88
SGCAQ16586 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.31□□□□□ -1.88
SGCAQ16586 AC069304.3-201ENST00000603938 1084 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
SGCAQ16586 RMST_10.1-201ENST00000616309 154 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 STMN1P1-201ENST00000617809 440 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 AC079684.1-201ENST00000621405 437 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 AC016717.3-201ENST00000624730 554 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 AC068724.3-201ENST00000625906 87 ntBASIC3.31□□□□□ -1.88
SGCAQ16586 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.31□□□□□ -1.88
SGCAQ16586 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
SGCAQ16586 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SGCAQ16586 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SGCAQ16586 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SGCAQ16586 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SGCAQ16586 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SGCAQ16586 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SGCAQ16586 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SGCAQ16586 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.3□□□□□ -1.88
SGCAQ16586 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.3□□□□□ -1.88
SGCAQ16586 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SGCAQ16586 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SGCAQ16586 AL049737.1-201ENST00000413920 1403 ntBASIC3.3□□□□□ -1.88
SGCAQ16586 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.3□□□□□ -1.88
SGCAQ16586 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SGCAQ16586 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SGCAQ16586 AC008432.1-201ENST00000615912 1320 ntBASIC3.3□□□□□ -1.88
SGCAQ16586 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SGCAQ16586 Y_RNA.110-201ENST00000363220 99 ntBASIC3.3□□□□□ -1.88
SGCAQ16586 SNORA7.2-201ENST00000364446 145 ntBASIC3.3□□□□□ -1.88
SGCAQ16586 MIR184-201ENST00000384962 84 ntBASIC3.3□□□□□ -1.88
SGCAQ16586 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SGCAQ16586 RPL32P23-201ENST00000397237 405 ntBASIC3.3□□□□□ -1.88
SGCAQ16586 ATP5F1P6-201ENST00000402768 767 ntBASIC3.3□□□□□ -1.88
SGCAQ16586 RN7SKP263-201ENST00000411194 309 ntBASIC3.3□□□□□ -1.88
SGCAQ16586 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.3□□□□□ -1.88
SGCAQ16586 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.3□□□□□ -1.88
SGCAQ16586 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.3□□□□□ -1.88
SGCAQ16586 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.3□□□□□ -1.88
SGCAQ16586 AC068135.1-201ENST00000446164 246 ntBASIC3.3□□□□□ -1.88
SGCAQ16586 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.3□□□□□ -1.88
SGCAQ16586 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.3□□□□□ -1.88
SGCAQ16586 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.3□□□□□ -1.88
SGCAQ16586 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.3□□□□□ -1.88
SGCAQ16586 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms