Protein–RNA interactions for Protein: P78317

RNF4, E3 ubiquitin-protein ligase RNF4, humanhuman

Predictions only

Length 190 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4P78317 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF4P78317 PSMA6P3-201ENST00000428242 164 ntBASIC5.33□□□□□ -1.56
RNF4P78317 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF4P78317 ATP5HP2-201ENST00000433885 485 ntBASIC5.33□□□□□ -1.56
RNF4P78317 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF4P78317 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF4P78317 AC064862.4-201ENST00000442180 334 ntBASIC5.33□□□□□ -1.56
RNF4P78317 AL161636.2-201ENST00000445179 927 ntBASIC5.33□□□□□ -1.56
RNF4P78317 AC079781.2-201ENST00000446424 169 ntBASIC5.33□□□□□ -1.56
RNF4P78317 OR7E116P-201ENST00000448529 957 ntBASIC5.33□□□□□ -1.56
RNF4P78317 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF4P78317 SETP20-201ENST00000457046 852 ntBASIC5.33□□□□□ -1.56
RNF4P78317 snoU13.8-201ENST00000458890 104 ntBASIC5.33□□□□□ -1.56
RNF4P78317 RPS23P6-201ENST00000466136 431 ntBASIC5.33□□□□□ -1.56
RNF4P78317 ATP5LP5-201ENST00000483050 299 ntBASIC5.33□□□□□ -1.56
RNF4P78317 RPL7P51-201ENST00000490532 749 ntBASIC5.33□□□□□ -1.56
RNF4P78317 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF4P78317 AK3P4-201ENST00000504283 583 ntBASIC5.33□□□□□ -1.56
RNF4P78317 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF4P78317 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.33□□□□□ -1.56
RNF4P78317 AC112191.2-201ENST00000522428 333 ntBASIC5.33□□□□□ -1.56
RNF4P78317 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF4P78317 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF4P78317 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF4P78317 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF4P78317 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF4P78317 RN7SL802P-201ENST00000577858 299 ntBASIC5.33□□□□□ -1.56
RNF4P78317 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF4P78317 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF4P78317 AC008782.1-201ENST00000603386 430 ntBASIC5.33□□□□□ -1.56
RNF4P78317 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF4P78317 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.33□□□□□ -1.56
RNF4P78317 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF4P78317 C2orf27A-204ENST00000623058 969 ntBASIC5.33□□□□□ -1.56
RNF4P78317 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF4P78317 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF4P78317 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF4P78317 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.33□□□□□ -1.56
RNF4P78317 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RNF4P78317 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RNF4P78317 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF4P78317 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF4P78317 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
RNF4P78317 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF4P78317 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF4P78317 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF4P78317 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
RNF4P78317 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF4P78317 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RNF4P78317 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF4P78317 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
RNF4P78317 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF4P78317 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF4P78317 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF4P78317 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF4P78317 AL034546.1-201ENST00000623740 3693 ntBASIC5.32□□□□□ -1.56
RNF4P78317 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF4P78317 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.32□□□□□ -1.56
RNF4P78317 AC109446.4-201ENST00000623235 2755 ntBASIC5.32□□□□□ -1.56
RNF4P78317 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF4P78317 SNORA64.1-201ENST00000362600 132 ntBASIC5.32□□□□□ -1.56
RNF4P78317 RNA5SP435-201ENST00000364044 108 ntBASIC5.32□□□□□ -1.56
RNF4P78317 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF4P78317 SNORA17A-201ENST00000391185 133 ntBASIC5.32□□□□□ -1.56
RNF4P78317 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF4P78317 RAB28P1-201ENST00000411517 641 ntBASIC5.32□□□□□ -1.56
RNF4P78317 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF4P78317 RPSAP35-201ENST00000413753 818 ntBASIC5.32□□□□□ -1.56
RNF4P78317 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF4P78317 AC009161.1-201ENST00000417306 376 ntBASIC5.32□□□□□ -1.56
RNF4P78317 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF4P78317 CRIP1P1-201ENST00000427567 185 ntBASIC5.32□□□□□ -1.56
RNF4P78317 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.32□□□□□ -1.56
RNF4P78317 USP24P1-201ENST00000433802 779 ntBASIC5.32□□□□□ -1.56
RNF4P78317 AC024082.2-201ENST00000434771 238 ntBASIC5.32□□□□□ -1.56
RNF4P78317 SUMO2P3-201ENST00000438311 288 ntBASIC5.32□□□□□ -1.56
RNF4P78317 HMGB3P9-201ENST00000441799 583 ntBASIC5.32□□□□□ -1.56
RNF4P78317 AL450996.1-201ENST00000445574 1202 ntBASIC5.32□□□□□ -1.56
RNF4P78317 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF4P78317 snoU13.7-201ENST00000459220 104 ntBASIC5.32□□□□□ -1.56
RNF4P78317 RPL30P11-201ENST00000495304 339 ntBASIC5.32□□□□□ -1.56
RNF4P78317 AC104109.1-201ENST00000498563 436 ntBASIC5.32□□□□□ -1.56
RNF4P78317 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF4P78317 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF4P78317 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.32□□□□□ -1.56
RNF4P78317 GAPDHP62-201ENST00000515313 990 ntBASIC5.32□□□□□ -1.56
RNF4P78317 IGKV3D-34-201ENST00000522638 302 ntBASIC5.32□□□□□ -1.56
RNF4P78317 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.32□□□□□ -1.56
RNF4P78317 AP005597.4-201ENST00000526762 229 ntBASIC5.32□□□□□ -1.56
RNF4P78317 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF4P78317 IGBP1P1-201ENST00000554337 1009 ntBASIC5.32□□□□□ -1.56
RNF4P78317 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.32□□□□□ -1.56
RNF4P78317 SULT1C2P2-201ENST00000562517 294 ntBASIC5.32□□□□□ -1.56
RNF4P78317 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF4P78317 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF4P78317 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF4P78317 AP001836.1-201ENST00000604675 523 ntBASIC5.32□□□□□ -1.56
RNF4P78317 AL162730.1-201ENST00000605734 292 ntBASIC5.32□□□□□ -1.56
RNF4P78317 AL049794.2-201ENST00000616301 365 ntBASIC5.32□□□□□ -1.56
RNF4P78317 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms