Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC3.49□□□□□ -1.85
LMO4P61968 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
LMO4P61968 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
LMO4P61968 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LMO4P61968 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.49□□□□□ -1.85
LMO4P61968 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.49□□□□□ -1.85
LMO4P61968 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LMO4P61968 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
LMO4P61968 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
LMO4P61968 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.49□□□□□ -1.85
LMO4P61968 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
LMO4P61968 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
LMO4P61968 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
LMO4P61968 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LMO4P61968 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LMO4P61968 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
LMO4P61968 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
LMO4P61968 SNORA51.12-201ENST00000384448 134 ntBASIC3.49□□□□□ -1.85
LMO4P61968 MIR134-201ENST00000385258 73 ntBASIC3.49□□□□□ -1.85
LMO4P61968 SNORD96B-201ENST00000386148 79 ntBASIC3.49□□□□□ -1.85
LMO4P61968 RPL32P23-201ENST00000397237 405 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AL590084.2-201ENST00000401481 382 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AL359643.1-201ENST00000404109 423 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AL445189.1-201ENST00000405722 338 ntBASIC3.49□□□□□ -1.85
LMO4P61968 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.49□□□□□ -1.85
LMO4P61968 RN7SKP27-201ENST00000410684 333 ntBASIC3.49□□□□□ -1.85
LMO4P61968 RN7SKP167-201ENST00000411047 285 ntBASIC3.49□□□□□ -1.85
LMO4P61968 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.49□□□□□ -1.85
LMO4P61968 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.49□□□□□ -1.85
LMO4P61968 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC3.49□□□□□ -1.85
LMO4P61968 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.49□□□□□ -1.85
LMO4P61968 OR5BE1P-201ENST00000425977 939 ntBASIC3.49□□□□□ -1.85
LMO4P61968 IFNNP1-201ENST00000429219 553 ntBASIC3.49□□□□□ -1.85
LMO4P61968 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.49□□□□□ -1.85
LMO4P61968 AC023347.2-201ENST00000433994 462 ntBASIC3.49□□□□□ -1.85
LMO4P61968 RPS26P40-201ENST00000435209 294 ntBASIC3.49□□□□□ -1.85
LMO4P61968 YWHAZP7-201ENST00000436906 631 ntBASIC3.49□□□□□ -1.85
LMO4P61968 RPL21P89-201ENST00000444021 467 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AL359073.1-201ENST00000448036 403 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AL162151.2-201ENST00000448875 158 ntBASIC3.49□□□□□ -1.85
LMO4P61968 RPL12P26-201ENST00000452430 487 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AC104689.1-201ENST00000473356 768 ntBASIC3.49□□□□□ -1.85
LMO4P61968 RPS29P19-201ENST00000479709 171 ntBASIC3.49□□□□□ -1.85
LMO4P61968 LINC00888-204ENST00000487386 421 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AC104164.2-201ENST00000496953 495 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LMO4P61968 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.49□□□□□ -1.85
LMO4P61968 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC3.49□□□□□ -1.85
LMO4P61968 RPL7L1P13-201ENST00000511702 739 ntBASIC3.49□□□□□ -1.85
LMO4P61968 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.49□□□□□ -1.85
LMO4P61968 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.49□□□□□ -1.85
LMO4P61968 AF186190.1-201ENST00000517470 480 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.49□□□□□ -1.85
LMO4P61968 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.49□□□□□ -1.85
LMO4P61968 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC3.49□□□□□ -1.85
LMO4P61968 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.49□□□□□ -1.85
LMO4P61968 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.49□□□□□ -1.85
LMO4P61968 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC3.49□□□□□ -1.85
LMO4P61968 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.49□□□□□ -1.85
LMO4P61968 MIR3915-201ENST00000578518 97 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.49□□□□□ -1.85
LMO4P61968 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.49□□□□□ -1.85
LMO4P61968 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.49□□□□□ -1.85
LMO4P61968 RN7SKP299-201ENST00000606679 301 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.49□□□□□ -1.85
LMO4P61968 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.49□□□□□ -1.85
LMO4P61968 AL161637.1-201ENST00000622380 412 ntBASIC3.49□□□□□ -1.85
LMO4P61968 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AF246928.1-201ENST00000623768 87 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AC007494.3-201ENST00000624660 743 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AC006927.3-201ENST00000638789 384 ntBASIC3.49□□□□□ -1.85
LMO4P61968 OR5BE1P-202ENST00000641168 1176 ntBASIC3.49□□□□□ -1.85
LMO4P61968 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LMO4P61968 USP45-204ENST00000369233 2514 ntTSL 5 BASIC3.49□□□□□ -1.85
LMO4P61968 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
LMO4P61968 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LMO4P61968 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LMO4P61968 MTND4P34-201ENST00000572715 1371 ntBASIC3.49□□□□□ -1.85
LMO4P61968 AP000526.1-201ENST00000603308 1388 ntBASIC3.49□□□□□ -1.85
LMO4P61968 RLIMP1-201ENST00000339626 1680 ntBASIC3.49□□□□□ -1.85
LMO4P61968 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LMO4P61968 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LMO4P61968 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LMO4P61968 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
LMO4P61968 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LMO4P61968 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LMO4P61968 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.48□□□□□ -1.85
LMO4P61968 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.48□□□□□ -1.85
LMO4P61968 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.48□□□□□ -1.85
LMO4P61968 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
LMO4P61968 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.48□□□□□ -1.85
LMO4P61968 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
LMO4P61968 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
LMO4P61968 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LMO4P61968 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LMO4P61968 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms