Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL161449.1-201ENST00000414531 1199 ntBASIC4.02□□□□□ -1.77
CDH13P55290 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH13P55290 AL732292.1-201ENST00000426692 226 ntBASIC4.02□□□□□ -1.77
CDH13P55290 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH13P55290 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH13P55290 RPL23AP33-201ENST00000442301 452 ntBASIC4.02□□□□□ -1.77
CDH13P55290 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH13P55290 HMGB3P22-202ENST00000451823 572 ntBASIC4.02□□□□□ -1.77
CDH13P55290 AC009963.2-201ENST00000453431 138 ntBASIC4.02□□□□□ -1.77
CDH13P55290 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.02□□□□□ -1.77
CDH13P55290 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.02□□□□□ -1.77
CDH13P55290 AC013828.1-201ENST00000481845 158 ntBASIC4.02□□□□□ -1.77
CDH13P55290 MTCYBP37-201ENST00000510642 1133 ntBASIC4.02□□□□□ -1.77
CDH13P55290 RN7SKP31-201ENST00000516354 278 ntBASIC4.02□□□□□ -1.77
CDH13P55290 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH13P55290 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.02□□□□□ -1.77
CDH13P55290 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH13P55290 AC105233.3-201ENST00000531125 744 ntBASIC4.02□□□□□ -1.77
CDH13P55290 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH13P55290 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH13P55290 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH13P55290 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.02□□□□□ -1.77
CDH13P55290 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.02□□□□□ -1.77
CDH13P55290 MTND4P33-201ENST00000556706 766 ntBASIC4.02□□□□□ -1.77
CDH13P55290 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.02□□□□□ -1.77
CDH13P55290 AC006116.5-201ENST00000591936 559 ntBASIC4.02□□□□□ -1.77
CDH13P55290 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDH13P55290 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.02□□□□□ -1.77
CDH13P55290 BNIP3P38-201ENST00000601117 544 ntBASIC4.02□□□□□ -1.77
CDH13P55290 AC109809.1-201ENST00000619665 545 ntBASIC4.02□□□□□ -1.77
CDH13P55290 AC006963.1-201ENST00000624003 1052 ntBASIC4.02□□□□□ -1.77
CDH13P55290 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.02□□□□□ -1.77
CDH13P55290 AP005264.7-201ENST00000625003 745 ntBASIC4.02□□□□□ -1.77
CDH13P55290 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH13P55290 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH13P55290 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
CDH13P55290 AL773545.4-201ENST00000637262 310 ntBASIC4.02□□□□□ -1.77
CDH13P55290 AL513478.4-201ENST00000641636 310 ntBASIC4.02□□□□□ -1.77
CDH13P55290 AC012618.3-205ENST00000637896 1496 ntBASIC4.02□□□□□ -1.77
CDH13P55290 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDH13P55290 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH13P55290 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH13P55290 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.01□□□□□ -1.77
CDH13P55290 AC107982.1-201ENST00000507171 1300 ntBASIC4.01□□□□□ -1.77
CDH13P55290 AC109315.1-201ENST00000584143 1347 ntBASIC4.01□□□□□ -1.77
CDH13P55290 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CDH13P55290 AC130650.2-201ENST00000618736 2403 ntBASIC4.01□□□□□ -1.77
CDH13P55290 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH13P55290 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH13P55290 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH13P55290 Y_RNA.25-201ENST00000362528 102 ntBASIC4.01□□□□□ -1.77
CDH13P55290 RNU5D-1-201ENST00000363299 116 ntBASIC4.01□□□□□ -1.77
CDH13P55290 SNORD116.1-201ENST00000365628 92 ntBASIC4.01□□□□□ -1.77
CDH13P55290 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CDH13P55290 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH13P55290 MIR1250-201ENST00000408098 113 ntBASIC4.01□□□□□ -1.77
CDH13P55290 RNU2-42P-201ENST00000410697 113 ntBASIC4.01□□□□□ -1.77
CDH13P55290 RAC1P3-201ENST00000416129 580 ntBASIC4.01□□□□□ -1.77
CDH13P55290 HMGB1P49-201ENST00000418882 569 ntBASIC4.01□□□□□ -1.77
CDH13P55290 AL391219.1-201ENST00000422570 483 ntBASIC4.01□□□□□ -1.77
CDH13P55290 USP9YP11-201ENST00000427537 717 ntBASIC4.01□□□□□ -1.77
CDH13P55290 RPL23AP46-201ENST00000438548 490 ntBASIC4.01□□□□□ -1.77
CDH13P55290 TPTE2P3-201ENST00000441562 1189 ntBASIC4.01□□□□□ -1.77
CDH13P55290 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH13P55290 Z73417.1-201ENST00000447373 778 ntBASIC4.01□□□□□ -1.77
CDH13P55290 AC104073.1-201ENST00000451988 151 ntBASIC4.01□□□□□ -1.77
CDH13P55290 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH13P55290 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH13P55290 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH13P55290 AC008837.2-201ENST00000513076 418 ntBASIC4.01□□□□□ -1.77
CDH13P55290 HIGD1AP3-201ENST00000515857 278 ntBASIC4.01□□□□□ -1.77
CDH13P55290 RN7SKP265-201ENST00000516448 223 ntBASIC4.01□□□□□ -1.77
CDH13P55290 RNU7-143P-201ENST00000516781 65 ntBASIC4.01□□□□□ -1.77
CDH13P55290 RNU4-60P-201ENST00000517239 135 ntBASIC4.01□□□□□ -1.77
CDH13P55290 IGLVIV-53-201ENST00000520107 367 ntBASIC4.01□□□□□ -1.77
CDH13P55290 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH13P55290 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH13P55290 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH13P55290 AL132657.2-201ENST00000564417 358 ntBASIC4.01□□□□□ -1.77
CDH13P55290 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH13P55290 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH13P55290 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH13P55290 AL161729.3-201ENST00000603533 673 ntBASIC4.01□□□□□ -1.77
CDH13P55290 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.01□□□□□ -1.77
CDH13P55290 AL009028.1-201ENST00000604895 802 ntBASIC4.01□□□□□ -1.77
CDH13P55290 AC013244.3-201ENST00000605614 388 ntBASIC4.01□□□□□ -1.77
CDH13P55290 HMGB1P50-201ENST00000605814 607 ntBASIC4.01□□□□□ -1.77
CDH13P55290 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH13P55290 AL359715.5-201ENST00000623431 443 ntBASIC4.01□□□□□ -1.77
CDH13P55290 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH13P55290 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH13P55290 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH13P55290 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH13P55290 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDH13P55290 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4□□□□□ -1.77
CDH13P55290 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CDH13P55290 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4□□□□□ -1.77
CDH13P55290 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4□□□□□ -1.77
CDH13P55290 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CDH13P55290 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms