Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.11□□□□□ -1.75
GPC3P51654 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.11□□□□□ -1.75
GPC3P51654 IGKV2D-19-201ENST00000523346 262 ntBASIC4.11□□□□□ -1.75
GPC3P51654 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.11□□□□□ -1.75
GPC3P51654 AC017100.2-201ENST00000584628 355 ntBASIC4.11□□□□□ -1.75
GPC3P51654 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.11□□□□□ -1.75
GPC3P51654 AC007687.1-201ENST00000602704 304 ntBASIC4.11□□□□□ -1.75
GPC3P51654 AC004777.1-201ENST00000624317 287 ntBASIC4.11□□□□□ -1.75
GPC3P51654 AC119674.1-207ENST00000641355 633 ntBASIC4.11□□□□□ -1.75
GPC3P51654 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.11□□□□□ -1.75
GPC3P51654 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GPC3P51654 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.11□□□□□ -1.75
GPC3P51654 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.11□□□□□ -1.75
GPC3P51654 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.11□□□□□ -1.75
GPC3P51654 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GPC3P51654 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.11□□□□□ -1.75
GPC3P51654 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GPC3P51654 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
GPC3P51654 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
GPC3P51654 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
GPC3P51654 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
GPC3P51654 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
GPC3P51654 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
GPC3P51654 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
GPC3P51654 RNU6-796P-201ENST00000391086 107 ntBASIC4.1□□□□□ -1.75
GPC3P51654 HMGN2P8-201ENST00000391458 268 ntBASIC4.1□□□□□ -1.75
GPC3P51654 ATF1P1-201ENST00000406040 927 ntBASIC4.1□□□□□ -1.75
GPC3P51654 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
GPC3P51654 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.1□□□□□ -1.75
GPC3P51654 PTP4A1P5-201ENST00000420305 455 ntBASIC4.1□□□□□ -1.75
GPC3P51654 AC017083.1-201ENST00000428093 483 ntBASIC4.1□□□□□ -1.75
GPC3P51654 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.1□□□□□ -1.75
GPC3P51654 HMGN2P31-201ENST00000432430 273 ntBASIC4.1□□□□□ -1.75
GPC3P51654 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.1□□□□□ -1.75
GPC3P51654 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.1□□□□□ -1.75
GPC3P51654 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.1□□□□□ -1.75
GPC3P51654 RPS3AP46-201ENST00000448352 682 ntBASIC4.1□□□□□ -1.75
GPC3P51654 DNAJC19P8-201ENST00000452887 259 ntBASIC4.1□□□□□ -1.75
GPC3P51654 ANP32BP2-201ENST00000454525 545 ntBASIC4.1□□□□□ -1.75
GPC3P51654 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.1□□□□□ -1.75
GPC3P51654 RPL9P32-201ENST00000464118 620 ntBASIC4.1□□□□□ -1.75
GPC3P51654 AC092451.1-201ENST00000480211 153 ntBASIC4.1□□□□□ -1.75
GPC3P51654 TRBV12-2-201ENST00000489763 344 ntBASIC4.1□□□□□ -1.75
GPC3P51654 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.1□□□□□ -1.75
GPC3P51654 RPL23AP73-201ENST00000492507 471 ntBASIC4.1□□□□□ -1.75
GPC3P51654 NIPA2P2-201ENST00000496376 1083 ntBASIC4.1□□□□□ -1.75
GPC3P51654 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.1□□□□□ -1.75
GPC3P51654 TMEM248P1-201ENST00000510579 951 ntBASIC4.1□□□□□ -1.75
GPC3P51654 NDUFB4P9-201ENST00000511646 388 ntBASIC4.1□□□□□ -1.75
GPC3P51654 RNU6-488P-201ENST00000515918 99 ntBASIC4.1□□□□□ -1.75
GPC3P51654 RN7SKP18-201ENST00000516005 275 ntBASIC4.1□□□□□ -1.75
GPC3P51654 OR8K2P-201ENST00000524645 927 ntBASIC4.1□□□□□ -1.75
GPC3P51654 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.1□□□□□ -1.75
GPC3P51654 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.1□□□□□ -1.75
GPC3P51654 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.1□□□□□ -1.75
GPC3P51654 MTCYBP28-201ENST00000566728 1132 ntBASIC4.1□□□□□ -1.75
GPC3P51654 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.1□□□□□ -1.75
GPC3P51654 AC090616.5-202ENST00000582111 297 ntBASIC4.1□□□□□ -1.75
GPC3P51654 AC010928.3-201ENST00000587712 541 ntBASIC4.1□□□□□ -1.75
GPC3P51654 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.1□□□□□ -1.75
GPC3P51654 YWHAQP7-201ENST00000603536 658 ntBASIC4.1□□□□□ -1.75
GPC3P51654 AL009028.1-201ENST00000604895 802 ntBASIC4.1□□□□□ -1.75
GPC3P51654 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.1□□□□□ -1.75
GPC3P51654 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.1□□□□□ -1.75
GPC3P51654 AC112503.2-201ENST00000609005 552 ntBASIC4.1□□□□□ -1.75
GPC3P51654 AC069200.1-201ENST00000609511 323 ntBASIC4.1□□□□□ -1.75
GPC3P51654 AC244100.1-202ENST00000621554 382 ntBASIC4.1□□□□□ -1.75
GPC3P51654 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.1□□□□□ -1.75
GPC3P51654 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.1□□□□□ -1.75
GPC3P51654 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.1□□□□□ -1.75
GPC3P51654 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.1□□□□□ -1.75
GPC3P51654 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.1□□□□□ -1.75
GPC3P51654 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
GPC3P51654 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
GPC3P51654 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
GPC3P51654 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
GPC3P51654 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
GPC3P51654 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.09□□□□□ -1.75
GPC3P51654 SNORD6-201ENST00000365444 73 ntBASIC4.09□□□□□ -1.75
GPC3P51654 RNU6-1005P-201ENST00000384519 107 ntBASIC4.09□□□□□ -1.75
GPC3P51654 RNU1-89P-201ENST00000384592 164 ntBASIC4.09□□□□□ -1.75
GPC3P51654 MIR7-3-201ENST00000384898 110 ntBASIC4.09□□□□□ -1.75
GPC3P51654 RNA5SP424-201ENST00000390988 115 ntBASIC4.09□□□□□ -1.75
GPC3P51654 ATP5F1P4-201ENST00000397288 746 ntBASIC4.09□□□□□ -1.75
GPC3P51654 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
GPC3P51654 EI24P1-201ENST00000416584 867 ntBASIC4.09□□□□□ -1.75
GPC3P51654 MTCYBP24-201ENST00000420387 1106 ntBASIC4.09□□□□□ -1.75
GPC3P51654 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.09□□□□□ -1.75
GPC3P51654 AC006946.1-201ENST00000429106 328 ntBASIC4.09□□□□□ -1.75
GPC3P51654 IFNNP1-201ENST00000429219 553 ntBASIC4.09□□□□□ -1.75
GPC3P51654 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.09□□□□□ -1.75
GPC3P51654 RPL21P110-201ENST00000433345 446 ntBASIC4.09□□□□□ -1.75
GPC3P51654 HSPD1P21-201ENST00000436541 245 ntBASIC4.09□□□□□ -1.75
GPC3P51654 AC006994.1-201ENST00000438212 839 ntBASIC4.09□□□□□ -1.75
GPC3P51654 AC006480.1-201ENST00000449887 378 ntBASIC4.09□□□□□ -1.75
GPC3P51654 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.09□□□□□ -1.75
GPC3P51654 RNU7-170P-201ENST00000459303 61 ntBASIC4.09□□□□□ -1.75
GPC3P51654 snoU13.22-201ENST00000459428 104 ntBASIC4.09□□□□□ -1.75
GPC3P51654 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.09□□□□□ -1.75
GPC3P51654 HMGN1P15-201ENST00000513870 295 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms