Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 UBE2CP3-201ENST00000502715 450 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 SCARNA14-201ENST00000516903 136 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 AC008489.1-201ENST00000524271 483 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 OR7E13P-201ENST00000526052 910 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 MTCYBP41-201ENST00000528913 1123 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 MTND5P21-201ENST00000531961 522 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 AC008011.1-201ENST00000545989 227 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.24□□□□□ -1.89
CX3CR1P49238 SNRPGP1-201ENST00000553864 222 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.24□□□□□ -1.89
CX3CR1P49238 TRAV15-201ENST00000556680 249 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.24□□□□□ -1.89
CX3CR1P49238 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.24□□□□□ -1.89
CX3CR1P49238 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.24□□□□□ -1.89
CX3CR1P49238 MIR3690-201ENST00000580266 75 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.24□□□□□ -1.89
CX3CR1P49238 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.24□□□□□ -1.89
CX3CR1P49238 IGHV3-29-201ENST00000604817 344 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 AL365503.1-201ENST00000605247 905 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 AC103710.3-201ENST00000608157 948 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 AC005156.1-201ENST00000613371 573 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CX3CR1P49238 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.24□□□□□ -1.89
CX3CR1P49238 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CX3CR1P49238 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CX3CR1P49238 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CX3CR1P49238 ZNF37BP-203ENST00000452306 1352 ntBASIC3.24□□□□□ -1.89
CX3CR1P49238 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CR1P49238 AC024560.2-201ENST00000507981 1497 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CX3CR1P49238 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CX3CR1P49238 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CX3CR1P49238 RNU6-335P-201ENST00000364563 113 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 RNU6-1151P-201ENST00000384684 107 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 MIR525-201ENST00000384978 85 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 RPL31P2-201ENST00000413849 377 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CX3CR1P49238 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CR1P49238 RSL24D1P6-201ENST00000426934 401 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 MTCO1P43-201ENST00000431831 488 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.23□□□□□ -1.89
CX3CR1P49238 AL590762.3-201ENST00000436372 640 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CR1P49238 H2AFZP6-201ENST00000444403 394 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CR1P49238 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.23□□□□□ -1.89
CX3CR1P49238 BX248409.1-201ENST00000455497 255 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CX3CR1P49238 CFTRP1-201ENST00000456646 183 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CR1P49238 VN1R105P-201ENST00000486595 910 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 CEACAMP10-202ENST00000495431 496 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 AL139099.1-201ENST00000497398 403 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CR1P49238 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CX3CR1P49238 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CR1P49238 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CR1P49238 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CR1P49238 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CR1P49238 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CR1P49238 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.23□□□□□ -1.89
CX3CR1P49238 AC107954.1-201ENST00000565906 727 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 MIR4738-201ENST00000579134 87 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CR1P49238 MIR4286-201ENST00000580651 93 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CR1P49238 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CR1P49238 AC011468.4-201ENST00000603942 409 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 AC112503.2-201ENST00000609005 552 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 AP006248.3-201ENST00000623580 594 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.23□□□□□ -1.89
CX3CR1P49238 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.23□□□□□ -1.89
CX3CR1P49238 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.23□□□□□ -1.89
CX3CR1P49238 MIR7153-201ENST00000637758 57 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 RIOK3P1-201ENST00000418778 1528 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CX3CR1P49238 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CX3CR1P49238 AC000367.1-201ENST00000452711 1766 ntBASIC3.23□□□□□ -1.89
CX3CR1P49238 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.22□□□□□ -1.89
CX3CR1P49238 AP004289.2-201ENST00000444413 1457 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CX3CR1P49238 MFSD8-213ENST00000641134 1327 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CX3CR1P49238 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CX3CR1P49238 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CX3CR1P49238 SNORA70.2-201ENST00000364506 135 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.22□□□□□ -1.89
CX3CR1P49238 MIR30B-201ENST00000384850 88 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 SOD2P1-201ENST00000396543 562 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CX3CR1P49238 PPIAP31-201ENST00000405422 495 ntBASIC3.22□□□□□ -1.89
CX3CR1P49238 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.22□□□□□ -1.89
CX3CR1P49238 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.22□□□□□ -1.89
CX3CR1P49238 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.22□□□□□ -1.89
CX3CR1P49238 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.22□□□□□ -1.89
CX3CR1P49238 AL591419.1-201ENST00000427423 339 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms