Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.34□□□□□ -1.87
CXCL12P48061 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CXCL12P48061 AL590623.1-201ENST00000427864 105 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.34□□□□□ -1.87
CXCL12P48061 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.34□□□□□ -1.87
CXCL12P48061 AC107083.1-201ENST00000439643 279 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.34□□□□□ -1.87
CXCL12P48061 AL157827.1-201ENST00000447622 132 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 AC239809.1-201ENST00000450470 217 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 SNRPGP5-201ENST00000456003 220 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 RN7SL863P-201ENST00000462370 296 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 RPL21P8-201ENST00000465083 535 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.34□□□□□ -1.87
CXCL12P48061 AC084357.1-201ENST00000473404 255 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.34□□□□□ -1.87
CXCL12P48061 AC069499.1-201ENST00000489433 509 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 AC090543.1-201ENST00000492168 485 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.34□□□□□ -1.87
CXCL12P48061 RNU6-362P-201ENST00000516736 90 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 RNU6-1308P-201ENST00000516817 103 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 RNU6-889P-201ENST00000517189 103 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.34□□□□□ -1.87
CXCL12P48061 AC006023.1-201ENST00000603944 259 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.34□□□□□ -1.87
CXCL12P48061 IGHV3-29-201ENST00000604817 344 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 AP004372.1-201ENST00000604842 844 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 KATNBL1P1-201ENST00000605192 748 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 AC116312.1-201ENST00000606841 314 ntBASIC3.34□□□□□ -1.87
CXCL12P48061 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CXCL12P48061 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CXCL12P48061 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
CXCL12P48061 AC093010.3-201ENST00000570269 15214 ntBASIC3.34□□□□□ -1.88
CXCL12P48061 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
CXCL12P48061 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CXCL12P48061 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CXCL12P48061 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.33□□□□□ -1.88
CXCL12P48061 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.33□□□□□ -1.88
CXCL12P48061 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CXCL12P48061 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CXCL12P48061 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CXCL12P48061 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CXCL12P48061 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
CXCL12P48061 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.33□□□□□ -1.88
CXCL12P48061 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CXCL12P48061 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CXCL12P48061 RNU6-301P-201ENST00000384277 107 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 RNU6-532P-201ENST00000384318 107 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 RNU6-603P-201ENST00000411403 107 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 AMD1P2-201ENST00000412936 992 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 LIPT1P1-201ENST00000415870 1186 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.33□□□□□ -1.88
CXCL12P48061 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.33□□□□□ -1.88
CXCL12P48061 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CXCL12P48061 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.33□□□□□ -1.88
CXCL12P48061 METTL15P1-201ENST00000481421 1045 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 AC139783.2-201ENST00000504847 1145 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 HAUS1P1-201ENST00000505275 832 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 AC118465.1-201ENST00000513820 1271 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 AC108471.1-201ENST00000513977 287 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 RN7SKP116-201ENST00000516902 319 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.33□□□□□ -1.88
CXCL12P48061 AC067852.3-201ENST00000589177 561 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 RPL12P50-201ENST00000603116 116 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
CXCL12P48061 AL033523.1-201ENST00000605153 153 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 AC135803.1-201ENST00000608748 565 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.33□□□□□ -1.88
CXCL12P48061 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.33□□□□□ -1.88
CXCL12P48061 AL136964.1-201ENST00000622038 2990 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 MIR4727-201ENST00000622232 55 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 AC000123.2-201ENST00000623124 461 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 AC018692.3-201ENST00000623929 123 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CXCL12P48061 MTCO1P24-201ENST00000515438 1558 ntBASIC3.33□□□□□ -1.88
CXCL12P48061 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.33□□□□□ -1.88
CXCL12P48061 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CXCL12P48061 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
CXCL12P48061 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.33□□□□□ -1.88
CXCL12P48061 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CXCL12P48061 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CXCL12P48061 RHOT1P2-201ENST00000366423 333 ntBASIC3.32□□□□□ -1.88
CXCL12P48061 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.32□□□□□ -1.88
CXCL12P48061 MTND3P20-201ENST00000407663 186 ntBASIC3.32□□□□□ -1.88
CXCL12P48061 Z99755.1-201ENST00000414048 380 ntBASIC3.32□□□□□ -1.88
CXCL12P48061 RPL7P53-201ENST00000421245 739 ntBASIC3.32□□□□□ -1.88
CXCL12P48061 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.32□□□□□ -1.88
CXCL12P48061 SETP5-201ENST00000437270 562 ntBASIC3.32□□□□□ -1.88
CXCL12P48061 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.32□□□□□ -1.88
CXCL12P48061 EXTL2P1-201ENST00000446218 416 ntBASIC3.32□□□□□ -1.88
CXCL12P48061 MRPL35P4-201ENST00000453682 566 ntBASIC3.32□□□□□ -1.88
CXCL12P48061 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.32□□□□□ -1.88
CXCL12P48061 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.32□□□□□ -1.88
CXCL12P48061 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.32□□□□□ -1.88
CXCL12P48061 AC068305.1-201ENST00000497406 726 ntBASIC3.32□□□□□ -1.88
CXCL12P48061 HMGB1P3-201ENST00000502802 616 ntBASIC3.32□□□□□ -1.88
CXCL12P48061 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.32□□□□□ -1.88
CXCL12P48061 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.32□□□□□ -1.88
CXCL12P48061 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.32□□□□□ -1.88
CXCL12P48061 AC093770.1-201ENST00000511559 571 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 354.6 ms