Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.6□□□□□ -1.83
TNFSF9P41273 RN7SKP82-201ENST00000516786 223 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 AC107934.2-201ENST00000518653 310 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.6□□□□□ -1.83
TNFSF9P41273 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.6□□□□□ -1.83
TNFSF9P41273 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFSF9P41273 AC015911.5-201ENST00000587076 451 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.6□□□□□ -1.83
TNFSF9P41273 uc_338.32-201ENST00000615087 172 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 AC009464.1-201ENST00000615731 469 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 MIR7112-201ENST00000616126 65 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFSF9P41273 OR11H5P-202ENST00000641612 1325 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 TNPO1P3-201ENST00000436471 2662 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFSF9P41273 Z83843.1-201ENST00000604070 3685 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TNFSF9P41273 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TNFSF9P41273 AL031985.3-201ENST00000565390 2449 ntBASIC3.6□□□□□ -1.83
TNFSF9P41273 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TNFSF9P41273 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TNFSF9P41273 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.59□□□□□ -1.83
TNFSF9P41273 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TNFSF9P41273 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.59□□□□□ -1.83
TNFSF9P41273 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TNFSF9P41273 RNA5SP391-201ENST00000363456 119 ntBASIC3.59□□□□□ -1.83
TNFSF9P41273 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
TNFSF9P41273 AL357075.1-201ENST00000404107 726 ntBASIC3.59□□□□□ -1.83
TNFSF9P41273 AL589655.1-201ENST00000405398 482 ntBASIC3.59□□□□□ -1.83
TNFSF9P41273 Z92545.1-201ENST00000411782 234 ntBASIC3.59□□□□□ -1.83
TNFSF9P41273 AL513174.1-201ENST00000423182 629 ntBASIC3.59□□□□□ -1.83
TNFSF9P41273 ELOCP6-201ENST00000429066 328 ntBASIC3.59□□□□□ -1.83
TNFSF9P41273 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFSF9P41273 CYCSP32-201ENST00000440548 321 ntBASIC3.59□□□□□ -1.83
TNFSF9P41273 AL353093.1-201ENST00000441292 436 ntBASIC3.59□□□□□ -1.83
TNFSF9P41273 ATP5C1P1-201ENST00000441945 895 ntBASIC3.59□□□□□ -1.83
TNFSF9P41273 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFSF9P41273 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.59□□□□□ -1.83
TNFSF9P41273 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFSF9P41273 ELOCP12-201ENST00000458706 328 ntBASIC3.59□□□□□ -1.83
TNFSF9P41273 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.59□□□□□ -1.83
TNFSF9P41273 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFSF9P41273 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFSF9P41273 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.59□□□□□ -1.83
TNFSF9P41273 RN7SKP57-201ENST00000517248 293 ntBASIC3.59□□□□□ -1.83
TNFSF9P41273 AC090281.1-201ENST00000523019 276 ntBASIC3.59□□□□□ -1.83
TNFSF9P41273 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.59□□□□□ -1.83
TNFSF9P41273 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.59□□□□□ -1.83
TNFSF9P41273 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.59□□□□□ -1.83
TNFSF9P41273 TGIF1P1-201ENST00000558095 802 ntBASIC3.59□□□□□ -1.83
TNFSF9P41273 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.59□□□□□ -1.83
TNFSF9P41273 AP003117.2-201ENST00000606010 545 ntBASIC3.59□□□□□ -1.83
TNFSF9P41273 AL356321.1-201ENST00000621360 228 ntBASIC3.59□□□□□ -1.83
TNFSF9P41273 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.59□□□□□ -1.84
TNFSF9P41273 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
TNFSF9P41273 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TNFSF9P41273 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
TNFSF9P41273 MTCO1P14-201ENST00000441695 1559 ntBASIC3.59□□□□□ -1.84
TNFSF9P41273 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TNFSF9P41273 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TNFSF9P41273 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
TNFSF9P41273 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
TNFSF9P41273 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
TNFSF9P41273 MIR142-201ENST00000384835 87 ntBASIC3.58□□□□□ -1.84
TNFSF9P41273 Z86062.1-201ENST00000406773 777 ntBASIC3.58□□□□□ -1.84
TNFSF9P41273 MTCO3P4-201ENST00000419236 787 ntBASIC3.58□□□□□ -1.84
TNFSF9P41273 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFSF9P41273 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.58□□□□□ -1.84
TNFSF9P41273 RPL23AP67-201ENST00000465341 474 ntBASIC3.58□□□□□ -1.84
TNFSF9P41273 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFSF9P41273 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.58□□□□□ -1.84
TNFSF9P41273 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFSF9P41273 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.58□□□□□ -1.84
TNFSF9P41273 NDUFB9P3-201ENST00000521269 501 ntBASIC3.58□□□□□ -1.84
TNFSF9P41273 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFSF9P41273 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFSF9P41273 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFSF9P41273 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFSF9P41273 NOP56P3-201ENST00000549457 385 ntBASIC3.58□□□□□ -1.84
TNFSF9P41273 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFSF9P41273 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFSF9P41273 AC015917.1-201ENST00000579654 510 ntBASIC3.58□□□□□ -1.84
TNFSF9P41273 CKS1BP3-201ENST00000600888 237 ntBASIC3.58□□□□□ -1.84
TNFSF9P41273 AL606834.2-201ENST00000602954 668 ntBASIC3.58□□□□□ -1.84
TNFSF9P41273 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFSF9P41273 OR2BH1P-201ENST00000608850 864 ntBASIC3.58□□□□□ -1.84
TNFSF9P41273 AC004825.2-201ENST00000616634 455 ntBASIC3.58□□□□□ -1.84
TNFSF9P41273 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
TNFSF9P41273 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TNFSF9P41273 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.58□□□□□ -1.84
TNFSF9P41273 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.58□□□□□ -1.84
TNFSF9P41273 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TNFSF9P41273 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.58□□□□□ -1.84
TNFSF9P41273 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.57□□□□□ -1.84
TNFSF9P41273 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TNFSF9P41273 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TNFSF9P41273 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TNFSF9P41273 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TNFSF9P41273 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TNFSF9P41273 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms