Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RPL36AP13-201ENST00000457490 317 ntBASIC4.68□□□□□ -1.66
CIITAP33076 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.68□□□□□ -1.66
CIITAP33076 RNU7-125P-201ENST00000458760 62 ntBASIC4.68□□□□□ -1.66
CIITAP33076 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.68□□□□□ -1.66
CIITAP33076 AC093755.1-201ENST00000512950 1023 ntBASIC4.68□□□□□ -1.66
CIITAP33076 RN7SKP283-201ENST00000517197 270 ntBASIC4.68□□□□□ -1.66
CIITAP33076 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.68□□□□□ -1.66
CIITAP33076 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.68□□□□□ -1.66
CIITAP33076 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.68□□□□□ -1.66
CIITAP33076 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.68□□□□□ -1.66
CIITAP33076 AC007224.1-201ENST00000564410 144 ntBASIC4.68□□□□□ -1.66
CIITAP33076 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.68□□□□□ -1.66
CIITAP33076 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.68□□□□□ -1.66
CIITAP33076 VIS1.1-201ENST00000610517 203 ntBASIC4.68□□□□□ -1.66
CIITAP33076 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CIITAP33076 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CIITAP33076 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CIITAP33076 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CIITAP33076 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
CIITAP33076 Z73965.1-201ENST00000623412 2297 ntBASIC4.67□□□□□ -1.66
CIITAP33076 AP000776.1-201ENST00000530032 1663 ntBASIC4.67□□□□□ -1.66
CIITAP33076 AC074029.4-201ENST00000624796 1859 ntBASIC4.67□□□□□ -1.66
CIITAP33076 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CIITAP33076 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CIITAP33076 AC021755.1-201ENST00000559747 1447 ntBASIC4.67□□□□□ -1.66
CIITAP33076 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CIITAP33076 OR11H4-201ENST00000315409 1082 ntBASIC4.67□□□□□ -1.66
CIITAP33076 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CIITAP33076 MIR525-201ENST00000384978 85 ntBASIC4.67□□□□□ -1.66
CIITAP33076 FABP12P1-201ENST00000401911 322 ntBASIC4.67□□□□□ -1.66
CIITAP33076 RPS24P12-201ENST00000402084 394 ntBASIC4.67□□□□□ -1.66
CIITAP33076 TPT1P2-201ENST00000413105 503 ntBASIC4.67□□□□□ -1.66
CIITAP33076 AL365203.2-201ENST00000423444 196 ntBASIC4.67□□□□□ -1.66
CIITAP33076 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.67□□□□□ -1.66
CIITAP33076 AL138785.1-201ENST00000425821 331 ntBASIC4.67□□□□□ -1.66
CIITAP33076 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.67□□□□□ -1.66
CIITAP33076 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.67□□□□□ -1.66
CIITAP33076 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.67□□□□□ -1.66
CIITAP33076 MTND2P4-201ENST00000445034 1004 ntBASIC4.67□□□□□ -1.66
CIITAP33076 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.67□□□□□ -1.66
CIITAP33076 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.67□□□□□ -1.66
CIITAP33076 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.67□□□□□ -1.66
CIITAP33076 RPL7P1-201ENST00000468161 747 ntBASIC4.67□□□□□ -1.66
CIITAP33076 RPL7P9-201ENST00000468715 747 ntBASIC4.67□□□□□ -1.66
CIITAP33076 RPS3AP43-201ENST00000479743 781 ntBASIC4.67□□□□□ -1.66
CIITAP33076 GAPDHP39-201ENST00000481866 979 ntBASIC4.67□□□□□ -1.66
CIITAP33076 RPL30P11-201ENST00000495304 339 ntBASIC4.67□□□□□ -1.66
CIITAP33076 AC091435.1-201ENST00000505442 584 ntBASIC4.67□□□□□ -1.66
CIITAP33076 STMN1P2-201ENST00000508435 439 ntBASIC4.67□□□□□ -1.66
CIITAP33076 PPBPP1-201ENST00000510807 373 ntBASIC4.67□□□□□ -1.66
CIITAP33076 OR5H4P-201ENST00000510851 923 ntBASIC4.67□□□□□ -1.66
CIITAP33076 OR5BM1P-201ENST00000512021 366 ntBASIC4.67□□□□□ -1.66
CIITAP33076 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.67□□□□□ -1.66
CIITAP33076 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.67□□□□□ -1.66
CIITAP33076 MTND6P33-201ENST00000571794 183 ntBASIC4.67□□□□□ -1.66
CIITAP33076 AL121834.1-201ENST00000572284 509 ntBASIC4.67□□□□□ -1.66
CIITAP33076 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.67□□□□□ -1.66
CIITAP33076 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.67□□□□□ -1.66
CIITAP33076 AL031666.3-201ENST00000609320 1006 ntBASIC4.67□□□□□ -1.66
CIITAP33076 AC023158.2-201ENST00000614876 543 ntBASIC4.67□□□□□ -1.66
CIITAP33076 AC008785.1-201ENST00000624475 456 ntBASIC4.67□□□□□ -1.66
CIITAP33076 AF001550.2-201ENST00000636643 217 ntBASIC4.67□□□□□ -1.66
CIITAP33076 OR8B1P-202ENST00000641132 1178 ntBASIC4.67□□□□□ -1.66
CIITAP33076 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CIITAP33076 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CIITAP33076 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CIITAP33076 AC087190.4-201ENST00000574616 8334 ntBASIC4.67□□□□□ -1.66
CIITAP33076 AP000526.1-201ENST00000603308 1388 ntBASIC4.66□□□□□ -1.66
CIITAP33076 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CIITAP33076 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CIITAP33076 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CIITAP33076 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CIITAP33076 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CIITAP33076 RNU1-108P-201ENST00000362556 161 ntBASIC4.66□□□□□ -1.66
CIITAP33076 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CIITAP33076 RNU5A-2P-201ENST00000384337 116 ntBASIC4.66□□□□□ -1.66
CIITAP33076 HNRNPDP2-201ENST00000406475 478 ntBASIC4.66□□□□□ -1.66
CIITAP33076 RNU6-757P-201ENST00000410334 100 ntBASIC4.66□□□□□ -1.66
CIITAP33076 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CIITAP33076 PAICSP7-201ENST00000419829 962 ntBASIC4.66□□□□□ -1.66
CIITAP33076 ZNF885P-201ENST00000420174 1098 ntBASIC4.66□□□□□ -1.66
CIITAP33076 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CIITAP33076 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.66□□□□□ -1.66
CIITAP33076 MTCO1P3-201ENST00000429327 192 ntBASIC4.66□□□□□ -1.66
CIITAP33076 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.66□□□□□ -1.66
CIITAP33076 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CIITAP33076 AL606662.1-201ENST00000445763 553 ntBASIC4.66□□□□□ -1.66
CIITAP33076 HMGB1P48-201ENST00000446155 598 ntBASIC4.66□□□□□ -1.66
CIITAP33076 HMGB1P16-201ENST00000447155 540 ntBASIC4.66□□□□□ -1.66
CIITAP33076 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.66□□□□□ -1.66
CIITAP33076 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.66□□□□□ -1.66
CIITAP33076 RPS27AP8-201ENST00000452665 445 ntBASIC4.66□□□□□ -1.66
CIITAP33076 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.66□□□□□ -1.66
CIITAP33076 FTH1P2-201ENST00000466086 412 ntBASIC4.66□□□□□ -1.66
CIITAP33076 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.66□□□□□ -1.66
CIITAP33076 KRT19P6-201ENST00000510983 209 ntBASIC4.66□□□□□ -1.66
CIITAP33076 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.66□□□□□ -1.66
CIITAP33076 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.66□□□□□ -1.66
CIITAP33076 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.66□□□□□ -1.66
CIITAP33076 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms