Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.34□□□□□ -1.71
CPS1P31327 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.34□□□□□ -1.71
CPS1P31327 MTCO3P20-201ENST00000454926 688 ntBASIC4.34□□□□□ -1.71
CPS1P31327 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.34□□□□□ -1.71
CPS1P31327 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CPS1P31327 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.34□□□□□ -1.71
CPS1P31327 AP000873.5-201ENST00000533906 236 ntBASIC4.34□□□□□ -1.71
CPS1P31327 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CPS1P31327 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.34□□□□□ -1.71
CPS1P31327 AC004832.5-201ENST00000608677 401 ntBASIC4.34□□□□□ -1.71
CPS1P31327 AC007496.3-201ENST00000624987 3443 ntBASIC4.34□□□□□ -1.71
CPS1P31327 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CPS1P31327 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.33□□□□□ -1.72
CPS1P31327 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CPS1P31327 SNORA67.4-201ENST00000384688 142 ntBASIC4.33□□□□□ -1.72
CPS1P31327 MIR184-201ENST00000384962 84 ntBASIC4.33□□□□□ -1.72
CPS1P31327 SMC4P1-201ENST00000414479 527 ntBASIC4.33□□□□□ -1.72
CPS1P31327 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.33□□□□□ -1.72
CPS1P31327 AC008549.1-201ENST00000512900 643 ntBASIC4.33□□□□□ -1.72
CPS1P31327 OR10D4P-201ENST00000525892 951 ntBASIC4.33□□□□□ -1.72
CPS1P31327 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.33□□□□□ -1.72
CPS1P31327 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.33□□□□□ -1.72
CPS1P31327 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.33□□□□□ -1.72
CPS1P31327 ASNSP1-201ENST00000518311 1939 ntBASIC4.33□□□□□ -1.72
CPS1P31327 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CPS1P31327 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CPS1P31327 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CPS1P31327 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.32□□□□□ -1.72
CPS1P31327 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CPS1P31327 OR1S2-201ENST00000302592 978 ntBASIC4.32□□□□□ -1.72
CPS1P31327 MIR30E-201ENST00000362104 92 ntBASIC4.32□□□□□ -1.72
CPS1P31327 MIR22-201ENST00000362190 85 ntBASIC4.32□□□□□ -1.72
CPS1P31327 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.32□□□□□ -1.72
CPS1P31327 MIR34A-201ENST00000385130 110 ntBASIC4.32□□□□□ -1.72
CPS1P31327 RPL7P25-201ENST00000404151 721 ntBASIC4.32□□□□□ -1.72
CPS1P31327 AC105402.1-201ENST00000413336 545 ntBASIC4.32□□□□□ -1.72
CPS1P31327 AC011242.1-201ENST00000433596 1158 ntBASIC4.32□□□□□ -1.72
CPS1P31327 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CPS1P31327 RPL37P4-201ENST00000448908 268 ntBASIC4.32□□□□□ -1.72
CPS1P31327 MRPS31P2-201ENST00000451581 518 ntBASIC4.32□□□□□ -1.72
CPS1P31327 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.32□□□□□ -1.72
CPS1P31327 RPS4XP22-201ENST00000480755 780 ntBASIC4.32□□□□□ -1.72
CPS1P31327 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.32□□□□□ -1.72
CPS1P31327 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.32□□□□□ -1.72
CPS1P31327 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CPS1P31327 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CPS1P31327 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CPS1P31327 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CPS1P31327 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CPS1P31327 AP002088.1-201ENST00000382740 395 ntBASIC4.31□□□□□ -1.72
CPS1P31327 SNORD15B-201ENST00000384714 146 ntBASIC4.31□□□□□ -1.72
CPS1P31327 FTH1P6-201ENST00000430768 320 ntBASIC4.31□□□□□ -1.72
CPS1P31327 CST9LP2-201ENST00000437612 320 ntBASIC4.31□□□□□ -1.72
CPS1P31327 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CPS1P31327 AC008837.1-201ENST00000511513 412 ntBASIC4.31□□□□□ -1.72
CPS1P31327 RN7SKP272-201ENST00000516988 232 ntBASIC4.31□□□□□ -1.72
CPS1P31327 AP002812.4-201ENST00000532139 286 ntBASIC4.31□□□□□ -1.72
CPS1P31327 AP002770.2-201ENST00000543613 532 ntBASIC4.31□□□□□ -1.72
CPS1P31327 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CPS1P31327 AC234778.2-201ENST00000566241 354 ntBASIC4.31□□□□□ -1.72
CPS1P31327 AC090312.2-201ENST00000582687 378 ntBASIC4.31□□□□□ -1.72
CPS1P31327 uc_338.1-201ENST00000612113 180 ntBASIC4.31□□□□□ -1.72
CPS1P31327 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.31□□□□□ -1.72
CPS1P31327 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CPS1P31327 AC092079.1-201ENST00000558620 1985 ntBASIC4.31□□□□□ -1.72
CPS1P31327 FAM133CP-201ENST00000332869 704 ntBASIC4.31□□□□□ -1.72
CPS1P31327 AC104058.1-201ENST00000448028 297 ntBASIC4.31□□□□□ -1.72
CPS1P31327 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.31□□□□□ -1.72
CPS1P31327 RPS3P1-201ENST00000456781 192 ntBASIC4.31□□□□□ -1.72
CPS1P31327 SNORD109B-201ENST00000458961 67 ntBASIC4.31□□□□□ -1.72
CPS1P31327 SNORD109A-201ENST00000459128 67 ntBASIC4.31□□□□□ -1.72
CPS1P31327 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.31□□□□□ -1.72
CPS1P31327 RN7SKP244-201ENST00000516513 307 ntBASIC4.31□□□□□ -1.72
CPS1P31327 AC079600.2-201ENST00000550076 130 ntBASIC4.31□□□□□ -1.72
CPS1P31327 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.31□□□□□ -1.72
CPS1P31327 AL158196.1-201ENST00000616786 434 ntBASIC4.31□□□□□ -1.72
CPS1P31327 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CPS1P31327 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CPS1P31327 RNU6-859P-201ENST00000362728 107 ntBASIC4.3□□□□□ -1.72
CPS1P31327 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CPS1P31327 RNU6-851P-201ENST00000384565 107 ntBASIC4.3□□□□□ -1.72
CPS1P31327 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.3□□□□□ -1.72
CPS1P31327 AC005189.1-201ENST00000431286 310 ntBASIC4.3□□□□□ -1.72
CPS1P31327 AC087499.2-201ENST00000432861 149 ntBASIC4.3□□□□□ -1.72
CPS1P31327 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.3□□□□□ -1.72
CPS1P31327 RPS12P18-201ENST00000442381 270 ntBASIC4.3□□□□□ -1.72
CPS1P31327 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.3□□□□□ -1.72
CPS1P31327 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.3□□□□□ -1.72
CPS1P31327 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CPS1P31327 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CPS1P31327 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CPS1P31327 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.29□□□□□ -1.72
CPS1P31327 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CPS1P31327 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CPS1P31327 RN7SKP192-201ENST00000411291 327 ntBASIC4.29□□□□□ -1.72
CPS1P31327 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.29□□□□□ -1.72
CPS1P31327 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.29□□□□□ -1.72
CPS1P31327 ANXA2P1-201ENST00000505539 926 ntBASIC4.29□□□□□ -1.72
CPS1P31327 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.29□□□□□ -1.72
CPS1P31327 AC008413.1-201ENST00000511864 177 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms