Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNU2-65P-201ENST00000410162 185 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 RNU6-55P-201ENST00000411092 107 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 RNU6-954P-201ENST00000411355 107 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 OSTCP5-201ENST00000425293 453 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 HMGN2P31-201ENST00000432430 273 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 AL357552.1-201ENST00000445254 415 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 AL627224.1-201ENST00000448334 444 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 AC146507.1-201ENST00000468335 354 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 RPL7P49-201ENST00000471402 708 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 AC020893.1-201ENST00000502452 580 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 AC006499.5-201ENST00000505037 514 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 AC005921.1-201ENST00000510589 286 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 RNU4-60P-201ENST00000517239 135 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 RN7SKP289-201ENST00000517244 295 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 DUXAP2-201ENST00000519198 589 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 IGKV2D-19-201ENST00000523346 262 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 AP001636.2-201ENST00000525517 696 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 AP004242.1-201ENST00000533701 349 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 AL049874.4-201ENST00000557593 255 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 AC067852.3-201ENST00000589177 561 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 AL392112.1-201ENST00000605115 829 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 U3.45-201ENST00000607547 219 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 AC019176.2-201ENST00000611579 315 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 AC084757.4-201ENST00000616350 526 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 AC004777.1-201ENST00000624317 287 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DMBP28068 AC007496.3-201ENST00000624987 3443 ntBASIC2.64□□□□□ -1.99
HLA-DMBP28068 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DMBP28068 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
HLA-DMBP28068 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DMBP28068 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DMBP28068 AL592494.2-201ENST00000425455 1548 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DMBP28068 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DMBP28068 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DMBP28068 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DMBP28068 MIR218-2-201ENST00000385006 110 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 HMGB1P10-201ENST00000395823 563 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
HLA-DMBP28068 AL513174.1-201ENST00000423182 629 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.63□□□□□ -1.99
HLA-DMBP28068 BX679664.1-201ENST00000434429 253 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 CYCSP43-201ENST00000438233 310 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 SLC31A1P1-201ENST00000451221 567 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 OR7L1P-201ENST00000456181 380 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 RPS4XP2-201ENST00000458402 793 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 AC010401.1-201ENST00000463867 348 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DMBP28068 AC106707.2-201ENST00000484182 374 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 SETP14-201ENST00000497538 873 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 AC021087.2-201ENST00000504656 1203 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DMBP28068 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DMBP28068 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DMBP28068 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DMBP28068 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.63□□□□□ -1.99
HLA-DMBP28068 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DMBP28068 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.63□□□□□ -1.99
HLA-DMBP28068 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DMBP28068 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.63□□□□□ -1.99
HLA-DMBP28068 AP000919.1-202ENST00000581139 1264 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 PCNAP1-202ENST00000595299 752 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 AC010591.1-201ENST00000603941 649 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 AL365400.2-201ENST00000605604 902 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 AC112503.1-201ENST00000608436 391 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 AC069209.1-201ENST00000619282 651 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 AC012314.7-201ENST00000619693 93 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 AC022079.2-201ENST00000619739 566 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 PLCE1P1-201ENST00000622094 305 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DMBP28068 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.63□□□□□ -1.99
HLA-DMBP28068 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DMBP28068 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DMBP28068 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DMBP28068 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DMBP28068 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DMBP28068 AC007256.1-201ENST00000392253 2765 ntBASIC2.62□□□□□ -1.99
HLA-DMBP28068 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms