Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.83□□□□□ -1.32
COL9A1P20849 AC011369.2-201ENST00000624423 1567 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL9A1P20849 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
COL9A1P20849 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
COL9A1P20849 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL9A1P20849 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.83□□□□□ -1.32
COL9A1P20849 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.83□□□□□ -1.32
COL9A1P20849 RNU6-858P-201ENST00000362436 107 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 RNA5SP321-201ENST00000362722 111 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 Y_RNA.480-201ENST00000384364 102 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 RN7SKP62-201ENST00000384539 329 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 RPS29P13-201ENST00000402041 169 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 AC007098.1-201ENST00000420122 367 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.83□□□□□ -1.32
COL9A1P20849 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL9A1P20849 RPL12P3-201ENST00000440080 396 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 AL034399.1-201ENST00000451535 380 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.83□□□□□ -1.32
COL9A1P20849 AL356981.1-201ENST00000454879 684 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 AC091180.1-201ENST00000462104 372 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 COX6CP14-201ENST00000469580 174 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 RNA5SP340-201ENST00000517132 107 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 AC069113.1-201ENST00000517763 267 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.83□□□□□ -1.32
COL9A1P20849 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.83□□□□□ -1.32
COL9A1P20849 AC092121.1-201ENST00000569452 202 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC6.83□□□□□ -1.32
COL9A1P20849 AC091133.5-201ENST00000603088 301 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 SNORD96A-201ENST00000606577 79 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 AL161616.1-201ENST00000611867 286 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 AL161637.1-201ENST00000622380 412 ntBASIC6.83□□□□□ -1.32
COL9A1P20849 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.83□□□□□ -1.32
COL9A1P20849 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
COL9A1P20849 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
COL9A1P20849 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL9A1P20849 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL9A1P20849 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL9A1P20849 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL9A1P20849 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC6.83□□□□□ -1.32
COL9A1P20849 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL9A1P20849 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.83□□□□□ -1.32
COL9A1P20849 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL9A1P20849 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC6.83□□□□□ -1.32
COL9A1P20849 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL9A1P20849 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.83□□□□□ -1.32
COL9A1P20849 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL9A1P20849 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
COL9A1P20849 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.83□□□□□ -1.32
COL9A1P20849 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL9A1P20849 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL9A1P20849 AL359922.2-201ENST00000581788 3017 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL9A1P20849 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.82□□□□□ -1.32
COL9A1P20849 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL9A1P20849 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL9A1P20849 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL9A1P20849 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL9A1P20849 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.82□□□□□ -1.32
COL9A1P20849 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.82□□□□□ -1.32
COL9A1P20849 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
COL9A1P20849 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.82□□□□□ -1.32
COL9A1P20849 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
COL9A1P20849 PPIAP24-201ENST00000328558 471 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 RNA5SP477-201ENST00000362639 119 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
COL9A1P20849 RNU6-790P-201ENST00000384479 105 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL9A1P20849 PRELID1P2-201ENST00000407805 396 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 CYCSP17-201ENST00000407870 315 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 RN7SKP125-201ENST00000410481 302 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 RNU6-516P-201ENST00000411381 104 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC6.82□□□□□ -1.32
COL9A1P20849 AC091390.1-201ENST00000433904 331 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 NOP56P2-201ENST00000447491 769 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 AC008264.1-201ENST00000447612 367 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 RPS17P13-201ENST00000448974 407 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.82□□□□□ -1.32
COL9A1P20849 MRPL42P6-201ENST00000486397 371 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC6.82□□□□□ -1.32
COL9A1P20849 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.82□□□□□ -1.32
COL9A1P20849 AC090151.1-201ENST00000520784 730 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.82□□□□□ -1.32
COL9A1P20849 SULT1C2P2-201ENST00000562517 294 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.82□□□□□ -1.32
COL9A1P20849 AC010463.3-201ENST00000594077 500 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 U2.14-201ENST00000615943 113 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 MIR376A1-201ENST00000616574 68 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 MIR6811-201ENST00000620409 58 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 AL365265.1-201ENST00000621045 234 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 AP000346.3-201ENST00000622821 210 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL9A1P20849 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL9A1P20849 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.82□□□□□ -1.32
COL9A1P20849 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL9A1P20849 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL9A1P20849 AL008638.3-201ENST00000623027 5182 ntBASIC6.82□□□□□ -1.32
COL9A1P20849 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms