Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SDC1P18827 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
SDC1P18827 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.51□□□□□ -1.85
SDC1P18827 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.51□□□□□ -1.85
SDC1P18827 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SDC1P18827 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.51□□□□□ -1.85
SDC1P18827 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SDC1P18827 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SDC1P18827 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SDC1P18827 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.51□□□□□ -1.85
SDC1P18827 OR1L1-202ENST00000373686 1083 ntBASIC3.51□□□□□ -1.85
SDC1P18827 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.51□□□□□ -1.85
SDC1P18827 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SDC1P18827 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
SDC1P18827 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SDC1P18827 MIR16-1-201ENST00000385271 89 ntBASIC3.51□□□□□ -1.85
SDC1P18827 OR51A3P-201ENST00000413596 924 ntBASIC3.51□□□□□ -1.85
SDC1P18827 AC027644.1-201ENST00000419595 298 ntBASIC3.51□□□□□ -1.85
SDC1P18827 PTP4A1P7-201ENST00000423476 514 ntBASIC3.51□□□□□ -1.85
SDC1P18827 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.51□□□□□ -1.85
SDC1P18827 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.51□□□□□ -1.85
SDC1P18827 C4BPAP2-201ENST00000428434 478 ntBASIC3.51□□□□□ -1.85
SDC1P18827 OR4F13P-201ENST00000428478 931 ntBASIC3.51□□□□□ -1.85
SDC1P18827 AL513175.1-201ENST00000431492 780 ntBASIC3.51□□□□□ -1.85
SDC1P18827 AL592437.1-201ENST00000443781 492 ntBASIC3.51□□□□□ -1.85
SDC1P18827 AC087385.1-201ENST00000475062 312 ntBASIC3.51□□□□□ -1.85
SDC1P18827 AC008427.1-201ENST00000503102 655 ntBASIC3.51□□□□□ -1.85
SDC1P18827 SUMO2P5-201ENST00000506790 245 ntBASIC3.51□□□□□ -1.85
SDC1P18827 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.51□□□□□ -1.85
SDC1P18827 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.51□□□□□ -1.85
SDC1P18827 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.51□□□□□ -1.85
SDC1P18827 PTP4A1P6-201ENST00000531034 478 ntBASIC3.51□□□□□ -1.85
SDC1P18827 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.51□□□□□ -1.85
SDC1P18827 AL121766.1-201ENST00000547436 487 ntBASIC3.51□□□□□ -1.85
SDC1P18827 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.51□□□□□ -1.85
SDC1P18827 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.51□□□□□ -1.85
SDC1P18827 BPTFP1-201ENST00000579209 492 ntBASIC3.51□□□□□ -1.85
SDC1P18827 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.51□□□□□ -1.85
SDC1P18827 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.51□□□□□ -1.85
SDC1P18827 AP003117.2-201ENST00000606010 545 ntBASIC3.51□□□□□ -1.85
SDC1P18827 AC092953.2-201ENST00000608000 699 ntBASIC3.51□□□□□ -1.85
SDC1P18827 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.51□□□□□ -1.85
SDC1P18827 AF129408.1-201ENST00000608767 431 ntBASIC3.51□□□□□ -1.85
SDC1P18827 MIR6748-201ENST00000610433 71 ntBASIC3.51□□□□□ -1.85
SDC1P18827 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.51□□□□□ -1.85
SDC1P18827 VN1R7P-201ENST00000619242 903 ntBASIC3.51□□□□□ -1.85
SDC1P18827 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.51□□□□□ -1.85
SDC1P18827 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.51□□□□□ -1.85
SDC1P18827 AP000553.6-201ENST00000641242 118 ntBASIC3.51□□□□□ -1.85
SDC1P18827 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SDC1P18827 AC138393.1-206ENST00000540997 1886 ntBASIC3.51□□□□□ -1.85
SDC1P18827 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SDC1P18827 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SDC1P18827 SGO1P1-201ENST00000603525 1447 ntBASIC3.51□□□□□ -1.85
SDC1P18827 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.51□□□□□ -1.85
SDC1P18827 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SDC1P18827 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SDC1P18827 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SDC1P18827 RNU6-619P-201ENST00000365146 108 ntBASIC3.5□□□□□ -1.85
SDC1P18827 MIR30B-201ENST00000384850 88 ntBASIC3.5□□□□□ -1.85
SDC1P18827 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SDC1P18827 DSTNP4-201ENST00000399472 474 ntBASIC3.5□□□□□ -1.85
SDC1P18827 SFR1P1-201ENST00000403720 688 ntBASIC3.5□□□□□ -1.85
SDC1P18827 Z98941.1-201ENST00000407764 100 ntBASIC3.5□□□□□ -1.85
SDC1P18827 RNA5SP239-201ENST00000410218 129 ntBASIC3.5□□□□□ -1.85
SDC1P18827 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.5□□□□□ -1.85
SDC1P18827 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.5□□□□□ -1.85
SDC1P18827 RSL24D1P6-201ENST00000426934 401 ntBASIC3.5□□□□□ -1.85
SDC1P18827 AL591419.1-201ENST00000427423 339 ntBASIC3.5□□□□□ -1.85
SDC1P18827 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC1P18827 RPS27AP12-201ENST00000429552 465 ntBASIC3.5□□□□□ -1.85
SDC1P18827 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.5□□□□□ -1.85
SDC1P18827 MTCYBP15-201ENST00000433123 1127 ntBASIC3.5□□□□□ -1.85
SDC1P18827 AC010881.1-201ENST00000433830 235 ntBASIC3.5□□□□□ -1.85
SDC1P18827 BMS1P19-201ENST00000433925 393 ntBASIC3.5□□□□□ -1.85
SDC1P18827 SDR42E1P3-201ENST00000438345 502 ntBASIC3.5□□□□□ -1.85
SDC1P18827 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC1P18827 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC1P18827 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC1P18827 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.5□□□□□ -1.85
SDC1P18827 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC1P18827 AC244505.3-201ENST00000454598 187 ntBASIC3.5□□□□□ -1.85
SDC1P18827 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC1P18827 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC1P18827 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.5□□□□□ -1.85
SDC1P18827 VN1R105P-201ENST00000486595 910 ntBASIC3.5□□□□□ -1.85
SDC1P18827 RPS3AP50-201ENST00000487064 803 ntBASIC3.5□□□□□ -1.85
SDC1P18827 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC1P18827 OR8I1P-201ENST00000529291 931 ntBASIC3.5□□□□□ -1.85
SDC1P18827 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.5□□□□□ -1.85
SDC1P18827 AC023161.2-201ENST00000551218 780 ntBASIC3.5□□□□□ -1.85
SDC1P18827 MIR4738-201ENST00000579134 87 ntBASIC3.5□□□□□ -1.85
SDC1P18827 AP001180.3-201ENST00000582221 145 ntBASIC3.5□□□□□ -1.85
SDC1P18827 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.5□□□□□ -1.85
SDC1P18827 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.5□□□□□ -1.85
SDC1P18827 RPAP2P1-201ENST00000603626 1168 ntBASIC3.5□□□□□ -1.85
SDC1P18827 AC115621.1-201ENST00000604653 858 ntBASIC3.5□□□□□ -1.85
SDC1P18827 AL034351.1-201ENST00000605288 668 ntBASIC3.5□□□□□ -1.85
SDC1P18827 AC010680.4-201ENST00000605334 543 ntBASIC3.5□□□□□ -1.85
SDC1P18827 AC018754.1-201ENST00000607486 925 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms