Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.44□□□□□ -1.86
NCK1P16333 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.44□□□□□ -1.86
NCK1P16333 TRAV31-201ENST00000502780 342 ntBASIC3.44□□□□□ -1.86
NCK1P16333 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.44□□□□□ -1.86
NCK1P16333 SNORA31.9-201ENST00000516429 84 ntBASIC3.44□□□□□ -1.86
NCK1P16333 RAB9BP1-201ENST00000519581 626 ntBASIC3.44□□□□□ -1.86
NCK1P16333 HMGB1P1-201ENST00000522557 636 ntBASIC3.44□□□□□ -1.86
NCK1P16333 OR7E13P-201ENST00000526052 910 ntBASIC3.44□□□□□ -1.86
NCK1P16333 AC009643.1-201ENST00000532030 391 ntBASIC3.44□□□□□ -1.86
NCK1P16333 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.44□□□□□ -1.86
NCK1P16333 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.44□□□□□ -1.86
NCK1P16333 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
NCK1P16333 TGIF1P1-201ENST00000558095 802 ntBASIC3.44□□□□□ -1.86
NCK1P16333 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.44□□□□□ -1.86
NCK1P16333 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.44□□□□□ -1.86
NCK1P16333 OR4G1P-201ENST00000588632 938 ntBASIC3.44□□□□□ -1.86
NCK1P16333 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.44□□□□□ -1.86
NCK1P16333 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.44□□□□□ -1.86
NCK1P16333 MIR6500-201ENST00000622700 86 ntBASIC3.44□□□□□ -1.86
NCK1P16333 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.44□□□□□ -1.86
NCK1P16333 RIOK3P1-201ENST00000418778 1528 ntBASIC3.44□□□□□ -1.86
NCK1P16333 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NCK1P16333 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NCK1P16333 ZNF849P-201ENST00000594711 1566 ntBASIC3.43□□□□□ -1.86
NCK1P16333 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
NCK1P16333 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NCK1P16333 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NCK1P16333 RNU6-335P-201ENST00000364563 113 ntBASIC3.43□□□□□ -1.86
NCK1P16333 U1.1-201ENST00000384101 164 ntBASIC3.43□□□□□ -1.86
NCK1P16333 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
NCK1P16333 OR51A3P-201ENST00000413596 924 ntBASIC3.43□□□□□ -1.86
NCK1P16333 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.43□□□□□ -1.86
NCK1P16333 UBE2V1P9-201ENST00000414760 368 ntBASIC3.43□□□□□ -1.86
NCK1P16333 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.43□□□□□ -1.86
NCK1P16333 AL807761.1-201ENST00000417622 171 ntBASIC3.43□□□□□ -1.86
NCK1P16333 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NCK1P16333 AC096632.1-201ENST00000427395 310 ntBASIC3.43□□□□□ -1.86
NCK1P16333 RPL36P19-201ENST00000430744 301 ntBASIC3.43□□□□□ -1.86
NCK1P16333 RPL17P35-201ENST00000432217 549 ntBASIC3.43□□□□□ -1.86
NCK1P16333 BMS1P19-201ENST00000433925 393 ntBASIC3.43□□□□□ -1.86
NCK1P16333 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.43□□□□□ -1.86
NCK1P16333 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.43□□□□□ -1.86
NCK1P16333 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.43□□□□□ -1.86
NCK1P16333 CYCSP53-201ENST00000455540 265 ntBASIC3.43□□□□□ -1.86
NCK1P16333 RPL5P24-201ENST00000463742 885 ntBASIC3.43□□□□□ -1.86
NCK1P16333 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.43□□□□□ -1.86
NCK1P16333 RPS4XP6-201ENST00000477670 797 ntBASIC3.43□□□□□ -1.86
NCK1P16333 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.43□□□□□ -1.86
NCK1P16333 AC110768.1-201ENST00000509222 400 ntBASIC3.43□□□□□ -1.86
NCK1P16333 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.43□□□□□ -1.86
NCK1P16333 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.43□□□□□ -1.86
NCK1P16333 RNU6-202P-201ENST00000515998 96 ntBASIC3.43□□□□□ -1.86
NCK1P16333 SCARNA14-201ENST00000516903 136 ntBASIC3.43□□□□□ -1.86
NCK1P16333 RN7SKP60-201ENST00000516985 239 ntBASIC3.43□□□□□ -1.86
NCK1P16333 MRPL49P2-201ENST00000521066 465 ntBASIC3.43□□□□□ -1.86
NCK1P16333 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.43□□□□□ -1.86
NCK1P16333 AL139174.1-201ENST00000531489 886 ntBASIC3.43□□□□□ -1.86
NCK1P16333 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
NCK1P16333 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.43□□□□□ -1.86
NCK1P16333 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.43□□□□□ -1.86
NCK1P16333 AC011602.1-201ENST00000546484 331 ntBASIC3.43□□□□□ -1.86
NCK1P16333 AC011611.5-201ENST00000552477 578 ntBASIC3.43□□□□□ -1.86
NCK1P16333 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.43□□□□□ -1.86
NCK1P16333 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.43□□□□□ -1.86
NCK1P16333 BPTFP1-201ENST00000579209 492 ntBASIC3.43□□□□□ -1.86
NCK1P16333 KPNA2P3-201ENST00000584190 848 ntBASIC3.43□□□□□ -1.86
NCK1P16333 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.43□□□□□ -1.86
NCK1P16333 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.43□□□□□ -1.86
NCK1P16333 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NCK1P16333 SNRPGP15-201ENST00000600149 222 ntBASIC3.43□□□□□ -1.86
NCK1P16333 AP002906.1-201ENST00000603405 233 ntBASIC3.43□□□□□ -1.86
NCK1P16333 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NCK1P16333 AC103710.3-201ENST00000608157 948 ntBASIC3.43□□□□□ -1.86
NCK1P16333 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NCK1P16333 AL357559.1-201ENST00000622228 274 ntBASIC3.43□□□□□ -1.86
NCK1P16333 AC090506.2-201ENST00000624521 419 ntBASIC3.43□□□□□ -1.86
NCK1P16333 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.43□□□□□ -1.86
NCK1P16333 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.43□□□□□ -1.86
NCK1P16333 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NCK1P16333 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.43□□□□□ -1.86
NCK1P16333 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NCK1P16333 AL021368.2-201ENST00000606125 5352 ntBASIC3.43□□□□□ -1.86
NCK1P16333 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NCK1P16333 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NCK1P16333 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
NCK1P16333 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NCK1P16333 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
NCK1P16333 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.42□□□□□ -1.86
NCK1P16333 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NCK1P16333 SNORA51.2-201ENST00000364595 132 ntBASIC3.42□□□□□ -1.86
NCK1P16333 SNORD65C-201ENST00000390962 71 ntBASIC3.42□□□□□ -1.86
NCK1P16333 RNU6-932P-201ENST00000391108 106 ntBASIC3.42□□□□□ -1.86
NCK1P16333 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NCK1P16333 AL590704.1-201ENST00000402856 794 ntBASIC3.42□□□□□ -1.86
NCK1P16333 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.42□□□□□ -1.86
NCK1P16333 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.42□□□□□ -1.86
NCK1P16333 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.42□□□□□ -1.86
NCK1P16333 RPS26P30-201ENST00000443431 335 ntBASIC3.42□□□□□ -1.86
NCK1P16333 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.42□□□□□ -1.86
NCK1P16333 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms