Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC105029.1-201ENST00000520250 669 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AP000859.1-201ENST00000525536 307 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AC063949.1-201ENST00000552900 865 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 MTCYBP13-201ENST00000578634 1093 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 MIR3668-201ENST00000582138 75 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AP001180.3-201ENST00000582221 145 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AC104010.1-201ENST00000616889 150 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 AC083843.2-201ENST00000568248 6253 ntBASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CSB-PGBD3P0DP91 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AL451142.1-201ENST00000375867 775 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 NFIB-202ENST00000380924 840 ntTSL 5 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 RNU6-1103P-201ENST00000384150 107 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 OR2AM1P-201ENST00000422137 422 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 RIMKLBP2-201ENST00000424737 654 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 USP24P1-201ENST00000433802 779 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AC108059.2-201ENST00000434626 151 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 IPO7P1-201ENST00000442031 636 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AC079448.1-201ENST00000449377 373 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 ACTR3P3-201ENST00000480448 893 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AC058823.1-201ENST00000485315 474 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 MAL2-203ENST00000534619 578 ntTSL 4 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AL390334.1-201ENST00000556395 450 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AC037471.2-201ENST00000564941 598 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AC022916.3-201ENST00000592961 742 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AC011373.1-201ENST00000607270 237 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AC005858.4-201ENST00000623191 700 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AP002907.1-201ENST00000606361 1430 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AC114774.1-201ENST00000507410 1770 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 AC092747.4-201ENST00000620519 1861 ntBASIC7.07□□□□□ -1.28
CSB-PGBD3P0DP91 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 HSPD1P8-201ENST00000400121 1658 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 IRF5P1-201ENST00000504852 2164 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 ANKRD62P1-201ENST00000434304 1623 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 RNU6-289P-201ENST00000364093 107 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 Y_RNA.431-201ENST00000384086 102 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 RNU6-441P-201ENST00000384545 106 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 MIR192-201ENST00000384915 110 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 AL078599.1-201ENST00000402075 293 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 RNU6-908P-201ENST00000410160 94 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 FCF1P1-201ENST00000432690 571 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 FTLP19-201ENST00000433300 394 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 SKP1P1-201ENST00000438081 489 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 RABEPKP1-201ENST00000440529 1026 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 CALM1P1-201ENST00000442082 433 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 THAP6-203ENST00000502620 582 ntTSL 3 BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 TMEM251P1-201ENST00000503717 318 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 RNU6-277P-201ENST00000516272 106 ntBASIC7.06□□□□□ -1.28
CSB-PGBD3P0DP91 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms