Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXD4P09016 RN7SL271P-201ENST00000487601 295 ntBASIC3.69□□□□□ -1.82
HOXD4P09016 RPL21P131-201ENST00000497298 483 ntBASIC3.69□□□□□ -1.82
HOXD4P09016 AC008837.1-201ENST00000511513 412 ntBASIC3.69□□□□□ -1.82
HOXD4P09016 AC112673.1-201ENST00000513168 575 ntBASIC3.69□□□□□ -1.82
HOXD4P09016 RNU6-311P-201ENST00000516224 102 ntBASIC3.69□□□□□ -1.82
HOXD4P09016 IGKV2-36-201ENST00000519999 223 ntBASIC3.69□□□□□ -1.82
HOXD4P09016 AC104417.1-201ENST00000523974 751 ntBASIC3.69□□□□□ -1.82
HOXD4P09016 OR4A2P-201ENST00000527276 913 ntBASIC3.69□□□□□ -1.82
HOXD4P09016 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.69□□□□□ -1.82
HOXD4P09016 LRRC6P1-201ENST00000532188 885 ntBASIC3.69□□□□□ -1.82
HOXD4P09016 AC139103.1-201ENST00000534696 1030 ntBASIC3.69□□□□□ -1.82
HOXD4P09016 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXD4P09016 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXD4P09016 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXD4P09016 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXD4P09016 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXD4P09016 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXD4P09016 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXD4P09016 MIR3944-201ENST00000581277 108 ntBASIC3.69□□□□□ -1.82
HOXD4P09016 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXD4P09016 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXD4P09016 AC022022.2-201ENST00000602989 360 ntBASIC3.69□□□□□ -1.82
HOXD4P09016 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXD4P09016 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXD4P09016 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXD4P09016 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.69□□□□□ -1.82
HOXD4P09016 AC138907.10-201ENST00000623708 983 ntBASIC3.69□□□□□ -1.82
HOXD4P09016 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXD4P09016 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXD4P09016 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
HOXD4P09016 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
HOXD4P09016 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXD4P09016 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXD4P09016 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD4P09016 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HOXD4P09016 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD4P09016 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD4P09016 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD4P09016 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD4P09016 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD4P09016 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD4P09016 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HOXD4P09016 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD4P09016 RNU6-98P-201ENST00000384173 107 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 AF228730.1-201ENST00000397972 663 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 RNU4-22P-201ENST00000411058 166 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD4P09016 MTND4P3-201ENST00000417829 541 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD4P09016 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD4P09016 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD4P09016 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXD4P09016 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD4P09016 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXD4P09016 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXD4P09016 RPL7P29-201ENST00000437151 728 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD4P09016 YWHAQP9-201ENST00000445891 512 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 AL133547.1-201ENST00000448546 220 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD4P09016 RAD23BP3-201ENST00000454157 1152 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 RPL37P3-201ENST00000456825 293 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 RPL7P15-201ENST00000461190 712 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 AF213884.1-201ENST00000488102 463 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.68□□□□□ -1.82
HOXD4P09016 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.68□□□□□ -1.82
HOXD4P09016 FTH1P9-201ENST00000513251 355 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD4P09016 AC022790.1-201ENST00000522872 204 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 OR4C2P-201ENST00000530855 1064 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD4P09016 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD4P09016 AC090888.2-201ENST00000559765 1144 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 HSPE1P5-201ENST00000561489 272 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 MIR5685-201ENST00000579080 79 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD4P09016 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD4P09016 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD4P09016 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD4P09016 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD4P09016 AC123767.1-202ENST00000620407 817 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 AC039056.2-201ENST00000622261 511 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 CR392039.5-201ENST00000623201 510 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 AC004777.1-201ENST00000624317 287 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 AP000676.4-201ENST00000624659 623 ntBASIC3.68□□□□□ -1.82
HOXD4P09016 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HOXD4P09016 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
HOXD4P09016 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD4P09016 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXD4P09016 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD4P09016 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD4P09016 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXD4P09016 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXD4P09016 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXD4P09016 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
HOXD4P09016 ERCC6-202ENST00000374127 1782 ntBASIC3.67□□□□□ -1.82
HOXD4P09016 ENSAP3-201ENST00000312710 333 ntBASIC3.67□□□□□ -1.82
HOXD4P09016 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms