Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RB1P06400 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RB1P06400 RNU6-115P-201ENST00000364310 107 ntBASIC4.39□□□□□ -1.71
RB1P06400 snoZ40.1-201ENST00000364540 72 ntBASIC4.39□□□□□ -1.71
RB1P06400 RNU6-906P-201ENST00000384700 70 ntBASIC4.39□□□□□ -1.71
RB1P06400 MIR195-201ENST00000385194 87 ntBASIC4.39□□□□□ -1.71
RB1P06400 SNORD66.1-201ENST00000391230 76 ntBASIC4.39□□□□□ -1.71
RB1P06400 AL121978.1-201ENST00000402778 359 ntBASIC4.39□□□□□ -1.71
RB1P06400 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RB1P06400 RPS3AP25-201ENST00000411660 793 ntBASIC4.39□□□□□ -1.71
RB1P06400 AC093578.1-201ENST00000415219 368 ntBASIC4.39□□□□□ -1.71
RB1P06400 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.39□□□□□ -1.71
RB1P06400 UBTFL3-201ENST00000418934 1024 ntBASIC4.39□□□□□ -1.71
RB1P06400 RPS15AP40-201ENST00000419621 391 ntBASIC4.39□□□□□ -1.71
RB1P06400 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.39□□□□□ -1.71
RB1P06400 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.39□□□□□ -1.71
RB1P06400 USP12PY-201ENST00000427677 1064 ntBASIC4.39□□□□□ -1.71
RB1P06400 OR4F13P-201ENST00000428478 931 ntBASIC4.39□□□□□ -1.71
RB1P06400 MTND2P5-201ENST00000432656 1006 ntBASIC4.39□□□□□ -1.71
RB1P06400 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.39□□□□□ -1.71
RB1P06400 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.39□□□□□ -1.71
RB1P06400 AC092393.1-201ENST00000439625 742 ntBASIC4.39□□□□□ -1.71
RB1P06400 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.39□□□□□ -1.71
RB1P06400 EEF1A1P39-201ENST00000440791 250 ntBASIC4.39□□□□□ -1.71
RB1P06400 AC006011.1-201ENST00000442758 349 ntBASIC4.39□□□□□ -1.71
RB1P06400 NDUFA5P7-201ENST00000452914 242 ntBASIC4.39□□□□□ -1.71
RB1P06400 PTGES3P5-201ENST00000455109 434 ntBASIC4.39□□□□□ -1.71
RB1P06400 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RB1P06400 OR9M1P-201ENST00000459641 921 ntBASIC4.39□□□□□ -1.71
RB1P06400 AC087879.1-201ENST00000474343 374 ntBASIC4.39□□□□□ -1.71
RB1P06400 UBTFL6-201ENST00000477929 1024 ntBASIC4.39□□□□□ -1.71
RB1P06400 DEFB109F-201ENST00000491870 277 ntBASIC4.39□□□□□ -1.71
RB1P06400 BNIP3P41-201ENST00000503774 571 ntBASIC4.39□□□□□ -1.71
RB1P06400 AC006499.5-201ENST00000505037 514 ntBASIC4.39□□□□□ -1.71
RB1P06400 AC018797.3-201ENST00000513388 1241 ntBASIC4.39□□□□□ -1.71
RB1P06400 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.39□□□□□ -1.71
RB1P06400 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.39□□□□□ -1.71
RB1P06400 DUXAP2-201ENST00000519198 589 ntBASIC4.39□□□□□ -1.71
RB1P06400 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.39□□□□□ -1.71
RB1P06400 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.39□□□□□ -1.71
RB1P06400 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.39□□□□□ -1.71
RB1P06400 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.39□□□□□ -1.71
RB1P06400 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.39□□□□□ -1.71
RB1P06400 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.39□□□□□ -1.71
RB1P06400 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.39□□□□□ -1.71
RB1P06400 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.39□□□□□ -1.71
RB1P06400 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RB1P06400 MIR4504-201ENST00000577413 92 ntBASIC4.39□□□□□ -1.71
RB1P06400 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.39□□□□□ -1.71
RB1P06400 AC008759.1-201ENST00000589783 983 ntBASIC4.39□□□□□ -1.71
RB1P06400 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.39□□□□□ -1.71
RB1P06400 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RB1P06400 AL161756.2-201ENST00000604597 246 ntBASIC4.39□□□□□ -1.71
RB1P06400 AC026790.2-201ENST00000606282 430 ntBASIC4.39□□□□□ -1.71
RB1P06400 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RB1P06400 AC068787.1-201ENST00000623908 691 ntBASIC4.39□□□□□ -1.71
RB1P06400 FAM157B-203ENST00000639350 358 ntBASIC4.39□□□□□ -1.71
RB1P06400 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RB1P06400 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RB1P06400 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RB1P06400 OR11H5P-202ENST00000641612 1325 ntBASIC4.39□□□□□ -1.71
RB1P06400 MTND4P26-201ENST00000415971 1359 ntBASIC4.39□□□□□ -1.71
RB1P06400 AC092435.4-201ENST00000623012 4159 ntBASIC4.39□□□□□ -1.71
RB1P06400 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RB1P06400 AC025125.1-201ENST00000624743 1922 ntBASIC4.38□□□□□ -1.71
RB1P06400 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RB1P06400 LINC00561-201ENST00000565815 2738 ntBASIC4.38□□□□□ -1.71
RB1P06400 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.38□□□□□ -1.71
RB1P06400 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.38□□□□□ -1.71
RB1P06400 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RB1P06400 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RB1P06400 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RB1P06400 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RB1P06400 RNA5SP502-201ENST00000362694 119 ntBASIC4.38□□□□□ -1.71
RB1P06400 RN7SKP44-201ENST00000363602 316 ntBASIC4.38□□□□□ -1.71
RB1P06400 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RB1P06400 SNORD65.1-201ENST00000390889 71 ntBASIC4.38□□□□□ -1.71
RB1P06400 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RB1P06400 AL136310.1-201ENST00000404926 654 ntBASIC4.38□□□□□ -1.71
RB1P06400 AL133264.1-201ENST00000407157 562 ntBASIC4.38□□□□□ -1.71
RB1P06400 AC009237.5-201ENST00000414271 501 ntBASIC4.38□□□□□ -1.71
RB1P06400 FCF1P2-201ENST00000415284 583 ntBASIC4.38□□□□□ -1.71
RB1P06400 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.38□□□□□ -1.71
RB1P06400 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RB1P06400 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.38□□□□□ -1.71
RB1P06400 OR5BE1P-201ENST00000425977 939 ntBASIC4.38□□□□□ -1.71
RB1P06400 NANOGP2-201ENST00000435391 727 ntBASIC4.38□□□□□ -1.71
RB1P06400 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.38□□□□□ -1.71
RB1P06400 Z80107.1-201ENST00000436830 412 ntBASIC4.38□□□□□ -1.71
RB1P06400 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.38□□□□□ -1.71
RB1P06400 PDSS1P2-201ENST00000449397 678 ntBASIC4.38□□□□□ -1.71
RB1P06400 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.38□□□□□ -1.71
RB1P06400 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.38□□□□□ -1.71
RB1P06400 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.38□□□□□ -1.71
RB1P06400 RPL37P6-202ENST00000464216 403 ntBASIC4.38□□□□□ -1.71
RB1P06400 AC087385.1-201ENST00000475062 312 ntBASIC4.38□□□□□ -1.71
RB1P06400 AC108729.1-201ENST00000487812 947 ntBASIC4.38□□□□□ -1.71
RB1P06400 SNX5P1-201ENST00000505757 1041 ntBASIC4.38□□□□□ -1.71
RB1P06400 VWA8P1-201ENST00000510889 176 ntBASIC4.38□□□□□ -1.71
RB1P06400 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms