Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 CEACAMP4-201ENST00000457676 421 ntBASIC3.06□□□□□ -1.92
TNFP01375 RPL6P9-201ENST00000466502 859 ntBASIC3.06□□□□□ -1.92
TNFP01375 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFP01375 RPS3AP14-201ENST00000483907 780 ntBASIC3.06□□□□□ -1.92
TNFP01375 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFP01375 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFP01375 ARL2BPP6-201ENST00000512757 439 ntBASIC3.06□□□□□ -1.92
TNFP01375 SNORD116-26-201ENST00000516006 96 ntBASIC3.06□□□□□ -1.92
TNFP01375 AC009812.2-201ENST00000517657 457 ntBASIC3.06□□□□□ -1.92
TNFP01375 AC113192.3-201ENST00000529152 742 ntBASIC3.06□□□□□ -1.92
TNFP01375 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TNFP01375 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFP01375 AC106782.4-201ENST00000568264 210 ntBASIC3.06□□□□□ -1.92
TNFP01375 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFP01375 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFP01375 AC010329.2-201ENST00000595195 2737 ntBASIC3.06□□□□□ -1.92
TNFP01375 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.06□□□□□ -1.92
TNFP01375 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFP01375 AC100793.4-201ENST00000613683 429 ntBASIC3.06□□□□□ -1.92
TNFP01375 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFP01375 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
TNFP01375 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TNFP01375 AC000403.1-201ENST00000613696 3585 ntBASIC3.05□□□□□ -1.92
TNFP01375 AC090229.1-201ENST00000590983 1609 ntBASIC3.05□□□□□ -1.92
TNFP01375 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TNFP01375 OR5H2-201ENST00000355273 945 ntBASIC3.05□□□□□ -1.92
TNFP01375 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
TNFP01375 RPL7P25-201ENST00000404151 721 ntBASIC3.05□□□□□ -1.92
TNFP01375 RN7SKP285-201ENST00000410137 318 ntBASIC3.05□□□□□ -1.92
TNFP01375 COTL1P1-201ENST00000422309 375 ntBASIC3.05□□□□□ -1.92
TNFP01375 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TNFP01375 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.05□□□□□ -1.92
TNFP01375 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.05□□□□□ -1.92
TNFP01375 AC016696.1-201ENST00000446949 318 ntBASIC3.05□□□□□ -1.92
TNFP01375 HMGB3P8-201ENST00000449709 577 ntBASIC3.05□□□□□ -1.92
TNFP01375 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.05□□□□□ -1.92
TNFP01375 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.05□□□□□ -1.92
TNFP01375 HMGN1P18-201ENST00000457642 277 ntBASIC3.05□□□□□ -1.92
TNFP01375 AC068724.1-201ENST00000487100 792 ntBASIC3.05□□□□□ -1.92
TNFP01375 TRAV31-201ENST00000502780 342 ntBASIC3.05□□□□□ -1.92
TNFP01375 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TNFP01375 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TNFP01375 PDCL2P2-201ENST00000533651 189 ntBASIC3.05□□□□□ -1.92
TNFP01375 MIR4458-201ENST00000578872 75 ntBASIC3.05□□□□□ -1.92
TNFP01375 LARP7P3-201ENST00000579888 337 ntBASIC3.05□□□□□ -1.92
TNFP01375 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.05□□□□□ -1.92
TNFP01375 AL591516.1-201ENST00000611326 274 ntBASIC3.05□□□□□ -1.92
TNFP01375 CR392039.4-201ENST00000624968 501 ntBASIC3.05□□□□□ -1.92
TNFP01375 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.05□□□□□ -1.92
TNFP01375 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TNFP01375 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TNFP01375 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
TNFP01375 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TNFP01375 AC118273.1-201ENST00000525324 3006 ntBASIC3.04□□□□□ -1.92
TNFP01375 AC009487.2-201ENST00000420969 6821 ntBASIC3.04□□□□□ -1.92
TNFP01375 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TNFP01375 MIR22-201ENST00000362190 85 ntBASIC3.04□□□□□ -1.92
TNFP01375 U3.26-201ENST00000391236 204 ntBASIC3.04□□□□□ -1.92
TNFP01375 AC110754.1-201ENST00000399740 601 ntBASIC3.04□□□□□ -1.92
TNFP01375 RN7SKP220-201ENST00000410611 288 ntBASIC3.04□□□□□ -1.92
TNFP01375 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.04□□□□□ -1.92
TNFP01375 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.04□□□□□ -1.92
TNFP01375 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TNFP01375 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.04□□□□□ -1.92
TNFP01375 CFTRP1-201ENST00000456646 183 ntBASIC3.04□□□□□ -1.92
TNFP01375 CYCSP20-201ENST00000473154 315 ntBASIC3.04□□□□□ -1.92
TNFP01375 AL049830.2-201ENST00000480072 201 ntBASIC3.04□□□□□ -1.92
TNFP01375 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.04□□□□□ -1.92
TNFP01375 SCARNA13-201ENST00000516672 275 ntBASIC3.04□□□□□ -1.92
TNFP01375 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.04□□□□□ -1.92
TNFP01375 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.04□□□□□ -1.92
TNFP01375 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.04□□□□□ -1.92
TNFP01375 AC090953.1-201ENST00000604305 1092 ntBASIC3.04□□□□□ -1.92
TNFP01375 AC011816.2-201ENST00000607089 556 ntBASIC3.04□□□□□ -1.92
TNFP01375 AC093732.2-201ENST00000607950 274 ntBASIC3.04□□□□□ -1.92
TNFP01375 AC008121.2-201ENST00000614647 523 ntBASIC3.04□□□□□ -1.92
TNFP01375 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.04□□□□□ -1.92
TNFP01375 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.04□□□□□ -1.92
TNFP01375 SCARNA15.3-201ENST00000626315 122 ntBASIC3.04□□□□□ -1.92
TNFP01375 AC073476.4-201ENST00000628409 72 ntBASIC3.04□□□□□ -1.92
TNFP01375 SCARNA4.1-201ENST00000628597 123 ntBASIC3.04□□□□□ -1.92
TNFP01375 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
TNFP01375 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TNFP01375 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.03□□□□□ -1.92
TNFP01375 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
TNFP01375 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.03□□□□□ -1.92
TNFP01375 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.03□□□□□ -1.92
TNFP01375 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
TNFP01375 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
TNFP01375 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TNFP01375 AL365361.1-201ENST00000566942 3481 ntBASIC3.03□□□□□ -1.92
TNFP01375 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TNFP01375 Y_RNA.111-201ENST00000363248 100 ntBASIC3.03□□□□□ -1.92
TNFP01375 RPL5P18-201ENST00000406671 891 ntBASIC3.03□□□□□ -1.92
TNFP01375 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.03□□□□□ -1.92
TNFP01375 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.03□□□□□ -1.92
TNFP01375 ARF4P2-201ENST00000430209 526 ntBASIC3.03□□□□□ -1.92
TNFP01375 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.03□□□□□ -1.92
TNFP01375 AL831737.1-201ENST00000441288 271 ntBASIC3.03□□□□□ -1.92
TNFP01375 AL353093.1-201ENST00000441292 436 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms