Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDGFBP01127 AC027290.2-201ENST00000623210 18662 ntBASIC3.96□□□□□ -1.77
PDGFBP01127 MTCO1P4-201ENST00000520516 1409 ntBASIC3.96□□□□□ -1.77
PDGFBP01127 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.96□□□□□ -1.78
PDGFBP01127 PABPC1P7-201ENST00000413177 1513 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFBP01127 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFBP01127 AC007685.1-201ENST00000329806 452 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFBP01127 RNU6-1243P-201ENST00000364028 107 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.96□□□□□ -1.78
PDGFBP01127 RNU6-1176P-201ENST00000390955 107 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.96□□□□□ -1.78
PDGFBP01127 RNU6-77P-201ENST00000410554 91 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.96□□□□□ -1.78
PDGFBP01127 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.96□□□□□ -1.78
PDGFBP01127 AC092641.1-201ENST00000440229 772 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.96□□□□□ -1.78
PDGFBP01127 GXYLT1P1-201ENST00000446657 490 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFBP01127 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.96□□□□□ -1.78
PDGFBP01127 STMN1P2-201ENST00000508435 439 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 VWA8P1-201ENST00000510889 176 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 AC010374.2-201ENST00000512933 535 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 MTCO3P27-201ENST00000514397 196 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 RNU5A-7P-201ENST00000515979 116 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 AP003355.1-201ENST00000518956 587 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 AC022695.1-201ENST00000522089 237 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.96□□□□□ -1.78
PDGFBP01127 AC063950.1-201ENST00000552036 308 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 AC011611.5-201ENST00000552477 578 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 DNAJC19P3-201ENST00000594491 331 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 AC008687.2-201ENST00000597865 520 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 VN1R9P-201ENST00000614184 867 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 AC078880.5-201ENST00000617845 421 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 U73479.1-201ENST00000618062 168 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 AP000943.4-201ENST00000622912 357 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 AC244258.1-201ENST00000637553 1071 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 ELL2P4-201ENST00000446870 1376 ntBASIC3.96□□□□□ -1.78
PDGFBP01127 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFBP01127 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFBP01127 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFBP01127 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PDGFBP01127 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFBP01127 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.96□□□□□ -1.78
PDGFBP01127 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFBP01127 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDGFBP01127 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
PDGFBP01127 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
PDGFBP01127 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
PDGFBP01127 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFBP01127 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFBP01127 AC025263.3-201ENST00000622965 1396 ntBASIC3.95□□□□□ -1.78
PDGFBP01127 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
PDGFBP01127 LAP3P1-201ENST00000403648 294 ntBASIC3.95□□□□□ -1.78
PDGFBP01127 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.95□□□□□ -1.78
PDGFBP01127 OR2X1P-201ENST00000421144 687 ntBASIC3.95□□□□□ -1.78
PDGFBP01127 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFBP01127 DEFB130D-201ENST00000426866 237 ntBASIC3.95□□□□□ -1.78
PDGFBP01127 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.95□□□□□ -1.78
PDGFBP01127 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.95□□□□□ -1.78
PDGFBP01127 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.95□□□□□ -1.78
PDGFBP01127 AC073063.1-201ENST00000434352 607 ntBASIC3.95□□□□□ -1.78
PDGFBP01127 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.95□□□□□ -1.78
PDGFBP01127 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.95□□□□□ -1.78
PDGFBP01127 HMGN2P21-201ENST00000447764 270 ntBASIC3.95□□□□□ -1.78
PDGFBP01127 AC005008.1-201ENST00000456151 612 ntBASIC3.95□□□□□ -1.78
PDGFBP01127 GTF2IP12-201ENST00000456547 356 ntBASIC3.95□□□□□ -1.78
PDGFBP01127 AC008481.1-201ENST00000463278 396 ntBASIC3.95□□□□□ -1.78
PDGFBP01127 AC087879.1-201ENST00000474343 374 ntBASIC3.95□□□□□ -1.78
PDGFBP01127 AC090013.1-201ENST00000485147 480 ntBASIC3.95□□□□□ -1.78
PDGFBP01127 RPL32P34-201ENST00000486380 400 ntBASIC3.95□□□□□ -1.78
PDGFBP01127 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.95□□□□□ -1.78
PDGFBP01127 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.95□□□□□ -1.78
PDGFBP01127 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.95□□□□□ -1.78
PDGFBP01127 IGHV3-32-201ENST00000519182 355 ntBASIC3.95□□□□□ -1.78
PDGFBP01127 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.95□□□□□ -1.78
PDGFBP01127 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.95□□□□□ -1.78
PDGFBP01127 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
PDGFBP01127 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.95□□□□□ -1.78
PDGFBP01127 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.95□□□□□ -1.78
PDGFBP01127 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFBP01127 MIR5187-201ENST00000583479 76 ntBASIC3.95□□□□□ -1.78
PDGFBP01127 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.95□□□□□ -1.78
PDGFBP01127 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.95□□□□□ -1.78
PDGFBP01127 AC068620.3-201ENST00000602749 560 ntBASIC3.95□□□□□ -1.78
PDGFBP01127 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.95□□□□□ -1.78
PDGFBP01127 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.95□□□□□ -1.78
PDGFBP01127 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.95□□□□□ -1.78
PDGFBP01127 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
PDGFBP01127 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFBP01127 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
PDGFBP01127 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.95□□□□□ -1.78
PDGFBP01127 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFBP01127 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFBP01127 SEPT7P7-201ENST00000420492 1301 ntBASIC3.95□□□□□ -1.78
PDGFBP01127 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.95□□□□□ -1.78
PDGFBP01127 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDGFBP01127 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDGFBP01127 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms