Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC010301.1-201ENST00000473936 355 ntBASIC4.01□□□□□ -1.77
ZIC3O60481 AC087879.1-201ENST00000474343 374 ntBASIC4.01□□□□□ -1.77
ZIC3O60481 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.01□□□□□ -1.77
ZIC3O60481 NIP7P2-201ENST00000485801 544 ntBASIC4.01□□□□□ -1.77
ZIC3O60481 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.01□□□□□ -1.77
ZIC3O60481 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.01□□□□□ -1.77
ZIC3O60481 RN7SL810P-201ENST00000493031 276 ntBASIC4.01□□□□□ -1.77
ZIC3O60481 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.01□□□□□ -1.77
ZIC3O60481 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.01□□□□□ -1.77
ZIC3O60481 AC090071.1-201ENST00000507713 644 ntBASIC4.01□□□□□ -1.77
ZIC3O60481 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.01□□□□□ -1.77
ZIC3O60481 MTND5P13-201ENST00000513046 1079 ntBASIC4.01□□□□□ -1.77
ZIC3O60481 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.01□□□□□ -1.77
ZIC3O60481 AL121766.1-201ENST00000547436 487 ntBASIC4.01□□□□□ -1.77
ZIC3O60481 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ZIC3O60481 CYCSP2-201ENST00000558168 301 ntBASIC4.01□□□□□ -1.77
ZIC3O60481 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.01□□□□□ -1.77
ZIC3O60481 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.01□□□□□ -1.77
ZIC3O60481 ACTR3BP3-201ENST00000565577 979 ntBASIC4.01□□□□□ -1.77
ZIC3O60481 AC012435.1-202ENST00000568772 240 ntBASIC4.01□□□□□ -1.77
ZIC3O60481 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ZIC3O60481 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.01□□□□□ -1.77
ZIC3O60481 AL596327.1-201ENST00000603629 213 ntBASIC4.01□□□□□ -1.77
ZIC3O60481 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
ZIC3O60481 AC018816.2-201ENST00000621460 353 ntBASIC4.01□□□□□ -1.77
ZIC3O60481 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ZIC3O60481 MFSD8-242ENST00000641690 4199 ntBASIC4.01□□□□□ -1.77
ZIC3O60481 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.01□□□□□ -1.77
ZIC3O60481 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
ZIC3O60481 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ZIC3O60481 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.01□□□□□ -1.77
ZIC3O60481 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ZIC3O60481 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4□□□□□ -1.77
ZIC3O60481 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4□□□□□ -1.77
ZIC3O60481 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
ZIC3O60481 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4□□□□□ -1.77
ZIC3O60481 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4□□□□□ -1.77
ZIC3O60481 AL079343.1-201ENST00000572358 1771 ntBASIC4□□□□□ -1.77
ZIC3O60481 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4□□□□□ -1.77
ZIC3O60481 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
ZIC3O60481 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4□□□□□ -1.77
ZIC3O60481 MIR331-201ENST00000362302 94 ntBASIC4□□□□□ -1.77
ZIC3O60481 SNORD96B-201ENST00000386148 79 ntBASIC4□□□□□ -1.77
ZIC3O60481 SNORA11F-201ENST00000408237 128 ntBASIC4□□□□□ -1.77
ZIC3O60481 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4□□□□□ -1.77
ZIC3O60481 AL158073.1-201ENST00000426848 1104 ntBASIC4□□□□□ -1.77
ZIC3O60481 OFD1P12Y-201ENST00000427963 1207 ntBASIC4□□□□□ -1.77
ZIC3O60481 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4□□□□□ -1.77
ZIC3O60481 RPL12P46-201ENST00000436610 195 ntBASIC4□□□□□ -1.77
ZIC3O60481 MTCO2P16-201ENST00000436962 677 ntBASIC4□□□□□ -1.77
ZIC3O60481 AC092427.1-201ENST00000439177 601 ntBASIC4□□□□□ -1.77
ZIC3O60481 AC114495.1-201ENST00000441274 436 ntBASIC4□□□□□ -1.77
ZIC3O60481 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4□□□□□ -1.77
ZIC3O60481 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4□□□□□ -1.77
ZIC3O60481 TAF9P1-201ENST00000445421 515 ntBASIC4□□□□□ -1.77
ZIC3O60481 VN1R10P-201ENST00000447106 875 ntBASIC4□□□□□ -1.77
ZIC3O60481 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4□□□□□ -1.77
ZIC3O60481 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4□□□□□ -1.77
ZIC3O60481 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4□□□□□ -1.77
ZIC3O60481 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4□□□□□ -1.77
ZIC3O60481 TAF9P2-201ENST00000454958 515 ntBASIC4□□□□□ -1.77
ZIC3O60481 RN7SL98P-201ENST00000462271 300 ntBASIC4□□□□□ -1.77
ZIC3O60481 AC092757.1-201ENST00000467293 467 ntBASIC4□□□□□ -1.77
ZIC3O60481 AC005726.1-201ENST00000494679 427 ntBASIC4□□□□□ -1.77
ZIC3O60481 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4□□□□□ -1.77
ZIC3O60481 AC110792.2-201ENST00000510278 224 ntBASIC4□□□□□ -1.77
ZIC3O60481 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4□□□□□ -1.77
ZIC3O60481 AC006499.2-201ENST00000513470 337 ntBASIC4□□□□□ -1.77
ZIC3O60481 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4□□□□□ -1.77
ZIC3O60481 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4□□□□□ -1.77
ZIC3O60481 AC106038.2-201ENST00000520706 568 ntBASIC4□□□□□ -1.77
ZIC3O60481 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4□□□□□ -1.77
ZIC3O60481 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4□□□□□ -1.77
ZIC3O60481 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4□□□□□ -1.77
ZIC3O60481 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ZIC3O60481 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4□□□□□ -1.77
ZIC3O60481 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4□□□□□ -1.77
ZIC3O60481 AGGF1P8-201ENST00000562979 1000 ntBASIC4□□□□□ -1.77
ZIC3O60481 MTCYBP28-201ENST00000566728 1132 ntBASIC4□□□□□ -1.77
ZIC3O60481 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4□□□□□ -1.77
ZIC3O60481 MIR4504-201ENST00000577413 92 ntBASIC4□□□□□ -1.77
ZIC3O60481 KPNA2P3-201ENST00000584190 848 ntBASIC4□□□□□ -1.77
ZIC3O60481 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4□□□□□ -1.77
ZIC3O60481 RPL7P50-201ENST00000600588 727 ntBASIC4□□□□□ -1.77
ZIC3O60481 AC083899.3-201ENST00000603413 594 ntBASIC4□□□□□ -1.77
ZIC3O60481 MIR378J-201ENST00000611988 109 ntBASIC4□□□□□ -1.77
ZIC3O60481 AC073114.1-201ENST00000612027 490 ntBASIC4□□□□□ -1.77
ZIC3O60481 AC243773.3-201ENST00000613270 256 ntBASIC4□□□□□ -1.77
ZIC3O60481 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4□□□□□ -1.77
ZIC3O60481 AC005086.4-201ENST00000623065 213 ntBASIC4□□□□□ -1.77
ZIC3O60481 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4□□□□□ -1.77
ZIC3O60481 AC011944.2-201ENST00000624440 683 ntBASIC4□□□□□ -1.77
ZIC3O60481 AC079228.1-201ENST00000624774 1049 ntBASIC4□□□□□ -1.77
ZIC3O60481 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4□□□□□ -1.77
ZIC3O60481 AC127502.3-201ENST00000636170 1206 ntBASIC4□□□□□ -1.77
ZIC3O60481 MTND5P28-201ENST00000438005 1594 ntBASIC4□□□□□ -1.77
ZIC3O60481 MTCO1P14-201ENST00000441695 1559 ntBASIC4□□□□□ -1.77
ZIC3O60481 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
ZIC3O60481 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4□□□□□ -1.77
ZIC3O60481 AC126323.6-202ENST00000568092 3511 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms