Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.89□□□□□ -1.79
PRKNO60260 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.89□□□□□ -1.79
PRKNO60260 NPM1P24-201ENST00000428039 894 ntBASIC3.89□□□□□ -1.79
PRKNO60260 RPS27AP12-201ENST00000429552 465 ntBASIC3.89□□□□□ -1.79
PRKNO60260 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.89□□□□□ -1.79
PRKNO60260 OR4C10P-201ENST00000434991 931 ntBASIC3.89□□□□□ -1.79
PRKNO60260 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.89□□□□□ -1.79
PRKNO60260 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.89□□□□□ -1.79
PRKNO60260 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.89□□□□□ -1.79
PRKNO60260 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.89□□□□□ -1.79
PRKNO60260 AL034418.1-201ENST00000448675 860 ntBASIC3.89□□□□□ -1.79
PRKNO60260 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.89□□□□□ -1.79
PRKNO60260 APOOP2-201ENST00000461561 539 ntBASIC3.89□□□□□ -1.79
PRKNO60260 AC006511.1-201ENST00000470614 315 ntBASIC3.89□□□□□ -1.79
PRKNO60260 AC068587.1-201ENST00000483613 781 ntBASIC3.89□□□□□ -1.79
PRKNO60260 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.89□□□□□ -1.79
PRKNO60260 SETP14-201ENST00000497538 873 ntBASIC3.89□□□□□ -1.79
PRKNO60260 ARL4AP1-201ENST00000503220 705 ntBASIC3.89□□□□□ -1.79
PRKNO60260 AC093824.1-201ENST00000508796 343 ntBASIC3.89□□□□□ -1.79
PRKNO60260 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.89□□□□□ -1.79
PRKNO60260 RN7SKP21-201ENST00000516503 220 ntBASIC3.89□□□□□ -1.79
PRKNO60260 AC105185.1-201ENST00000518705 535 ntBASIC3.89□□□□□ -1.79
PRKNO60260 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.89□□□□□ -1.79
PRKNO60260 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PRKNO60260 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.89□□□□□ -1.79
PRKNO60260 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.89□□□□□ -1.79
PRKNO60260 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PRKNO60260 AC068446.3-201ENST00000555285 382 ntBASIC3.89□□□□□ -1.79
PRKNO60260 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.89□□□□□ -1.79
PRKNO60260 AC022655.2-201ENST00000577280 318 ntBASIC3.89□□□□□ -1.79
PRKNO60260 OR4K7P-201ENST00000580232 945 ntBASIC3.89□□□□□ -1.79
PRKNO60260 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.89□□□□□ -1.79
PRKNO60260 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.89□□□□□ -1.79
PRKNO60260 AC010857.1-201ENST00000606398 594 ntBASIC3.89□□□□□ -1.79
PRKNO60260 AL451064.1-201ENST00000607718 471 ntBASIC3.89□□□□□ -1.79
PRKNO60260 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRKNO60260 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRKNO60260 AL607023.1-201ENST00000620045 248 ntBASIC3.89□□□□□ -1.79
PRKNO60260 AC079248.2-201ENST00000623779 326 ntBASIC3.89□□□□□ -1.79
PRKNO60260 BMS1P21-201ENST00000634565 365 ntBASIC3.89□□□□□ -1.79
PRKNO60260 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
PRKNO60260 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PRKNO60260 AC022031.1-201ENST00000585985 2593 ntBASIC3.89□□□□□ -1.79
PRKNO60260 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.89□□□□□ -1.79
PRKNO60260 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRKNO60260 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.88□□□□□ -1.79
PRKNO60260 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PRKNO60260 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PRKNO60260 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRKNO60260 AC134882.1-201ENST00000603738 1676 ntBASIC3.88□□□□□ -1.79
PRKNO60260 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.88□□□□□ -1.79
PRKNO60260 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PRKNO60260 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PRKNO60260 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRKNO60260 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRKNO60260 AL356489.2-201ENST00000566968 3528 ntBASIC3.88□□□□□ -1.79
PRKNO60260 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRKNO60260 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
PRKNO60260 AC016716.1-201ENST00000265882 708 ntBASIC3.88□□□□□ -1.79
PRKNO60260 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PRKNO60260 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PRKNO60260 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PRKNO60260 RNA5SP515-201ENST00000364570 118 ntBASIC3.88□□□□□ -1.79
PRKNO60260 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.88□□□□□ -1.79
PRKNO60260 RNU1-13P-201ENST00000384499 162 ntBASIC3.88□□□□□ -1.79
PRKNO60260 RNA5SP372-201ENST00000390836 115 ntBASIC3.88□□□□□ -1.79
PRKNO60260 RPS26P8-201ENST00000393490 348 ntBASIC3.88□□□□□ -1.79
PRKNO60260 AL139098.1-201ENST00000407291 389 ntBASIC3.88□□□□□ -1.79
PRKNO60260 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.88□□□□□ -1.79
PRKNO60260 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKNO60260 GSTM3P2-201ENST00000412746 530 ntBASIC3.88□□□□□ -1.79
PRKNO60260 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.88□□□□□ -1.79
PRKNO60260 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKNO60260 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKNO60260 SKP1P3-201ENST00000429280 487 ntBASIC3.88□□□□□ -1.79
PRKNO60260 AL050321.1-201ENST00000432363 400 ntBASIC3.88□□□□□ -1.79
PRKNO60260 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
PRKNO60260 AL356276.2-201ENST00000435919 558 ntBASIC3.88□□□□□ -1.79
PRKNO60260 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKNO60260 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKNO60260 AL591503.2-201ENST00000442314 1005 ntBASIC3.88□□□□□ -1.79
PRKNO60260 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKNO60260 RSL24D1P3-201ENST00000449255 495 ntBASIC3.88□□□□□ -1.79
PRKNO60260 RPL23AP15-201ENST00000450202 459 ntBASIC3.88□□□□□ -1.79
PRKNO60260 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.88□□□□□ -1.79
PRKNO60260 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKNO60260 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
PRKNO60260 AC010307.1-201ENST00000467206 836 ntBASIC3.88□□□□□ -1.79
PRKNO60260 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.88□□□□□ -1.79
PRKNO60260 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.88□□□□□ -1.79
PRKNO60260 BZW1P2-201ENST00000473537 826 ntBASIC3.88□□□□□ -1.79
PRKNO60260 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.88□□□□□ -1.79
PRKNO60260 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.88□□□□□ -1.79
PRKNO60260 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKNO60260 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PRKNO60260 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.88□□□□□ -1.79
PRKNO60260 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.88□□□□□ -1.79
PRKNO60260 MTCO1P35-201ENST00000515270 228 ntBASIC3.88□□□□□ -1.79
PRKNO60260 RNU6-202P-201ENST00000515998 96 ntBASIC3.88□□□□□ -1.79
PRKNO60260 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms