Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
PTPDC1A2A3K4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PTPDC1A2A3K4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPDC1A2A3K4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
PTPDC1A2A3K4 AC092447.7-201ENST00000422212 1621 ntBASIC5.48□□□□□ -1.53
PTPDC1A2A3K4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PTPDC1A2A3K4 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPDC1A2A3K4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPDC1A2A3K4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPDC1A2A3K4 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PTPDC1A2A3K4 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPDC1A2A3K4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 AC093775.1-201ENST00000624154 1868 ntBASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 AL031985.3-201ENST00000565390 2449 ntBASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 RNU6-1042P-201ENST00000384204 107 ntBASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 RPS3AP23-201ENST00000401762 784 ntBASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 FCF1P9-201ENST00000412546 282 ntBASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 RPL17P12-201ENST00000413391 526 ntBASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 AL389915.1-201ENST00000422463 466 ntBASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 AC092427.1-201ENST00000439177 601 ntBASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 AC011352.1-201ENST00000512300 793 ntBASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 AL110118.1-201ENST00000553543 400 ntBASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 COX6CP4-201ENST00000605798 228 ntBASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 AC243773.3-201ENST00000613270 256 ntBASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 AC005832.2-201ENST00000538921 1430 ntBASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTPDC1A2A3K4 ZFRP1-201ENST00000457579 2970 ntBASIC5.46□□□□□ -1.53
PTPDC1A2A3K4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.46□□□□□ -1.53
PTPDC1A2A3K4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
PTPDC1A2A3K4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 RNU6-657P-201ENST00000383904 107 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 Y_RNA.516-201ENST00000384541 124 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 SNORD96B-201ENST00000386148 79 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 OR6C69P-201ENST00000394268 893 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AL049697.2-201ENST00000403708 294 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AL078604.1-201ENST00000404609 466 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 Z74021.1-201ENST00000423610 407 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 MTCYBP5-201ENST00000423752 1135 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 SDCBPP2-201ENST00000424643 885 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AL158073.1-201ENST00000426848 1104 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 ZYG11AP1-201ENST00000430329 837 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AC016712.1-201ENST00000431088 378 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 OR2B8P-201ENST00000432841 938 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 ARL2BPP10-201ENST00000446487 531 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 MTCO1P48-201ENST00000448024 1096 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 snoU13.1-201ENST00000459157 104 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AC097493.1-201ENST00000463958 372 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AC006511.1-201ENST00000470614 315 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AK3P4-201ENST00000504283 583 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AP003392.2-201ENST00000527269 208 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AP000790.1-201ENST00000528891 737 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AL389895.1-201ENST00000554127 252 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AL390334.1-201ENST00000556395 450 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 RBM11P1-201ENST00000604951 799 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AC008498.1-201ENST00000613012 531 ntBASIC5.46□□□□□ -1.54
PTPDC1A2A3K4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms