Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RPL23AP39-201ENST00000415533 405 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 Z99497.1-201ENST00000421282 135 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 RPL12P34-201ENST00000424532 479 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 RPL23AP1-201ENST00000428990 471 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 AC244035.1-201ENST00000430042 390 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 USP9YP35-201ENST00000435696 412 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 AC129850.1-201ENST00000436203 508 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 MTCO1P48-201ENST00000448024 1096 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 RPL23AP35-201ENST00000451906 501 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 TRGVB-201ENST00000453257 471 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 PPIAP21-201ENST00000464473 501 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 PGBD4P4-201ENST00000509673 613 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 OR51K1P-201ENST00000510214 950 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 RNA5SP154-201ENST00000516193 111 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 IGLVIV-65-201ENST00000517313 360 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 NPM1P6-201ENST00000521088 871 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 ACTR3BP3-201ENST00000565577 979 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 RPL26P30-202ENST00000602923 645 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 AC012603.1-201ENST00000606424 528 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 AC092653.1-201ENST00000608509 531 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 MIR6864-201ENST00000617935 70 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 AC092140.2-201ENST00000618027 521 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 AP005019.3-201ENST00000620418 560 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 RNU6-156P-201ENST00000621869 107 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 AC127502.3-201ENST00000636170 1206 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 AC099063.3-201ENST00000642066 185 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 BTBD10P1-201ENST00000549824 1352 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 RNA5SP388-201ENST00000362584 119 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 RNA5SP391-201ENST00000363456 119 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 RNU4-24P-201ENST00000364565 139 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 SNORA37-201ENST00000384504 129 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 RNU2-28P-201ENST00000410457 189 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 RPS3AP9-201ENST00000417027 792 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 AC092473.1-201ENST00000441098 221 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 MTCO2P18-201ENST00000457151 658 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 AC010469.1-201ENST00000463864 576 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 AC080014.1-201ENST00000496877 1201 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 SNX5P1-201ENST00000505757 1041 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 AC018797.3-201ENST00000513388 1241 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 AC106038.2-201ENST00000520706 568 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 AC068831.4-201ENST00000556118 109 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 RPL12P25-202ENST00000598100 674 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 AF131215.7-201ENST00000602443 707 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 AC122108.2-201ENST00000611946 526 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 AL049539.1-201ENST00000611964 459 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 AC018816.2-201ENST00000621460 353 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 AP001784.1-201ENST00000624107 428 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 OR5BR1P-201ENST00000524992 1330 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 MTND5P24-201ENST00000438892 1767 ntBASIC4.34□□□□□ -1.71
TCRBV7S3A2A0A539 OR56B2P-202ENST00000641377 2453 ntBASIC4.34□□□□□ -1.72
TCRBV7S3A2A0A539 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
TCRBV7S3A2A0A539 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
TCRBV7S3A2A0A539 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 AL079343.1-201ENST00000572358 1771 ntBASIC4.33□□□□□ -1.72
TCRBV7S3A2A0A539 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms