Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.79□□□□□ -1.96
TRAV27A0A087WT01 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 ZNF542P-204ENST00000482727 1305 ntBASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 TAF9BP1-201ENST00000396646 746 ntBASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 PRELID3BP11-201ENST00000414230 479 ntBASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 AC244033.1-201ENST00000426826 870 ntBASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 CYCSP43-201ENST00000438233 310 ntBASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 CACYBPP1-201ENST00000438592 684 ntBASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 ELOCP3-201ENST00000439303 348 ntBASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 AC093331.1-201ENST00000521474 169 ntBASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 AC087888.1-201ENST00000550884 1254 ntBASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 CCDC58P3-201ENST00000590792 430 ntBASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 AC107294.3-201ENST00000609211 526 ntBASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 AC006133.1-201ENST00000617106 264 ntBASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 U6.105-201ENST00000637379 88 ntBASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 MTND5P27-201ENST00000428871 1720 ntBASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRAV27A0A087WT01 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 AC005300.1-201ENST00000428401 373 ntBASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 AC016696.1-201ENST00000446949 318 ntBASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 MORF4L1P4-201ENST00000450245 976 ntBASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 AC109925.1-201ENST00000478069 331 ntBASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 AP004242.1-201ENST00000533701 349 ntBASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 MIR3158-1-201ENST00000583596 81 ntBASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 UBL5P2-201ENST00000583788 219 ntBASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 AC138932.5-201ENST00000617759 563 ntBASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 AC099506.2-201ENST00000623074 221 ntBASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 AC034229.5-201ENST00000624258 185 ntBASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 AC024341.1-201ENST00000526444 1552 ntBASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 AC093010.3-201ENST00000570269 15214 ntBASIC2.77□□□□□ -1.97
TRAV27A0A087WT01 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 ZNF826P-207ENST00000622273 1910 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 SNORD15B-201ENST00000384714 146 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 MIR183-201ENST00000384958 110 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 HSPE1P26-201ENST00000405341 275 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 HMGB1P13-201ENST00000406019 642 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AL356967.1-201ENST00000406305 431 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AL034374.1-201ENST00000406329 351 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 RNA5SP274-201ENST00000410484 108 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 TRGV6-201ENST00000417928 299 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AC091862.1-201ENST00000438016 1100 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 SNORA84-201ENST00000459229 133 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AC091153.1-201ENST00000466297 402 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 RPL5P23-201ENST00000496040 868 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AC023050.1-201ENST00000498198 304 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 RN7SKP43-201ENST00000516173 320 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 SNORA67.7-201ENST00000516664 135 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AC025423.2-201ENST00000537570 439 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AL606834.2-201ENST00000602954 668 ntBASIC2.76□□□□□ -1.97
TRAV27A0A087WT01 AC015967.1-201ENST00000619893 476 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms