Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 SAGE2P-201ENST00000420011 2126 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AL079343.1-201ENST00000572358 1771 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 OR11H5P-202ENST00000641612 1325 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 RNU1-83P-201ENST00000363426 164 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 RNU6-374P-201ENST00000364146 108 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 RNA5SP513-201ENST00000364648 118 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 ZNF603P-201ENST00000405613 487 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AL603766.1-201ENST00000407763 664 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 RPL23AP39-201ENST00000415533 405 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AL590139.1-201ENST00000416267 400 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AL953862.1-201ENST00000423016 168 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AC096632.1-201ENST00000427395 310 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AL589823.1-201ENST00000429577 183 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 CEACAMP1-201ENST00000434624 1035 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 TAF9P1-201ENST00000445421 515 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 RPL36AP33-201ENST00000450395 310 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 KATNBL1P6-201ENST00000453433 915 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 ZNF114P1-201ENST00000453500 292 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 USP9YP10-201ENST00000454868 628 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 TAF9P2-201ENST00000454958 515 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AC090142.1-201ENST00000465776 462 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AL024509.2-201ENST00000493462 493 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 MTCYBP37-201ENST00000510642 1133 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 USP9YP5-201ENST00000511770 630 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 SNORD116-26-201ENST00000516006 96 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AC008802.1-201ENST00000519121 791 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 CR383656.6-201ENST00000550518 394 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AC074029.1-201ENST00000552531 1044 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AC068446.3-201ENST00000555285 382 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AC015912.2-201ENST00000571053 181 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 RPL26P30-202ENST00000602923 645 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AC104785.1-201ENST00000603220 588 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 RN7SKP299-201ENST00000606679 301 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 RNU6-88P-201ENST00000606801 100 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AC106028.5-201ENST00000610332 395 ntBASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.33□□□□□ -1.72
DTX4Q9Y2E6 AC107068.1-201ENST00000563286 4218 ntBASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 AL390237.1-201ENST00000404226 1415 ntBASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 RNU6-623P-201ENST00000363143 105 ntBASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 RNU6-660P-201ENST00000364566 109 ntBASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 RNA5SP505-201ENST00000364748 108 ntBASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 RN7SKP106-201ENST00000410832 272 ntBASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 AC004022.2-201ENST00000413824 193 ntBASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.32□□□□□ -1.72
DTX4Q9Y2E6 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms