Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AP000435.1-201ENST00000528539 496 ntBASIC6.79□□□□□ -1.32
LHX6Q9UPM6 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 MIR378C-201ENST00000578683 81 ntBASIC6.79□□□□□ -1.32
LHX6Q9UPM6 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.79□□□□□ -1.32
LHX6Q9UPM6 MIR6721-201ENST00000617181 87 ntBASIC6.79□□□□□ -1.32
LHX6Q9UPM6 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
LHX6Q9UPM6 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 AP003175.1-201ENST00000641383 6658 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 AC009229.4-201ENST00000623854 1947 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 AC010894.1-201ENST00000313760 361 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 Y_RNA.71-201ENST00000362892 104 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 RNA5SP382-201ENST00000363355 112 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 RNA5SP267-201ENST00000364893 126 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 RNA5SP279-201ENST00000365513 117 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 RNU6-701P-201ENST00000384059 107 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 SNORA40-201ENST00000388090 126 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 RAB28P5-201ENST00000427490 651 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 FTH1P20-201ENST00000434913 548 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 RN7SL492P-201ENST00000460700 295 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 AC006511.1-201ENST00000470614 315 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 AC016065.2-201ENST00000514530 444 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 AC104057.1-201ENST00000515547 497 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 SNORD116-25-201ENST00000516517 92 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 AC026956.1-201ENST00000558741 396 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 ULK4P1-202ENST00000565174 503 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 AC002310.3-201ENST00000569728 723 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 BDH2P1-201ENST00000602288 736 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 SNX29P2-204ENST00000603801 875 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 AC084757.4-201ENST00000616350 526 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 uc_338.21-201ENST00000622458 147 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 NCOA4P3-201ENST00000513203 1877 ntBASIC6.78□□□□□ -1.32
LHX6Q9UPM6 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
LHX6Q9UPM6 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.77□□□□□ -1.32
LHX6Q9UPM6 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC6.77□□□□□ -1.32
LHX6Q9UPM6 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LHX6Q9UPM6 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LHX6Q9UPM6 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
LHX6Q9UPM6 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.77□□□□□ -1.33
LHX6Q9UPM6 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
LHX6Q9UPM6 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
LHX6Q9UPM6 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.77□□□□□ -1.33
LHX6Q9UPM6 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
LHX6Q9UPM6 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LHX6Q9UPM6 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms