Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC104687.1-201ENST00000485829 412 ntBASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 HMGB3P14-201ENST00000494195 599 ntBASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 RNU2-27P-201ENST00000516185 142 ntBASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 SOD1P3-201ENST00000518682 454 ntBASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 PDCL2P2-201ENST00000533651 189 ntBASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 AP004242.1-201ENST00000533701 349 ntBASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 CENPUP2-201ENST00000555897 1186 ntBASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 AC005412.1-201ENST00000580812 1049 ntBASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 AC010591.1-201ENST00000603941 649 ntBASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTNNA3Q9UI47 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.28□□□□□ -1.73
CTNNA3Q9UI47 GABPAP-201ENST00000419271 1356 ntBASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 MTCO1P12-201ENST00000414273 1543 ntBASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 MIR183-201ENST00000384958 110 ntBASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 RN7SKP285-201ENST00000410137 318 ntBASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 CEACAMP4-201ENST00000457676 421 ntBASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 AC096992.1-201ENST00000459808 709 ntBASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 AC023598.1-201ENST00000472521 361 ntBASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 TRAV31-201ENST00000502780 342 ntBASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 AC093770.1-201ENST00000511559 571 ntBASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 AL121594.4-201ENST00000556211 1196 ntBASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 AC037471.2-201ENST00000564941 598 ntBASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 AC007656.2-201ENST00000624902 4547 ntBASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTNNA3Q9UI47 AC090337.1-201ENST00000579651 2074 ntBASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 HMGB1P10-201ENST00000395823 563 ntBASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 SYF2P2-201ENST00000417620 583 ntBASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 HSFY1P1-201ENST00000423928 1178 ntBASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 RPL32P34-201ENST00000486380 400 ntBASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 AL358832.1-201ENST00000497800 389 ntBASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 HMGB1P3-201ENST00000502802 616 ntBASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 AC005351.1-201ENST00000511152 786 ntBASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 AP001542.1-201ENST00000591314 200 ntBASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 AC006116.10-201ENST00000591836 581 ntBASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 AC022387.2-201ENST00000604050 448 ntBASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 ELOCP35-201ENST00000604289 336 ntBASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 AC005858.4-201ENST00000623191 700 ntBASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 AC007823.1-201ENST00000569932 1566 ntBASIC4.26□□□□□ -1.73
CTNNA3Q9UI47 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 AC093908.1-201ENST00000623125 8092 ntBASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 SNORD6-201ENST00000365444 73 ntBASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 RNU2-37P-201ENST00000410695 177 ntBASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 Z92545.1-201ENST00000411782 234 ntBASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 RPS7P15-201ENST00000415804 584 ntBASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 OSTCP5-201ENST00000425293 453 ntBASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 HSPD1P21-201ENST00000436541 245 ntBASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 HMGB1P5-202ENST00000451497 985 ntBASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 MRPS31P2-201ENST00000451581 518 ntBASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 RN7SL293P-201ENST00000481765 281 ntBASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 WBP1LP4-201ENST00000505043 344 ntBASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 GMPSP1-201ENST00000514075 579 ntBASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.25□□□□□ -1.73
CTNNA3Q9UI47 POLR2KP1-201ENST00000553226 168 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms