Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MIR4319-201ENST00000577285 85 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 AL390838.2-201ENST00000602394 274 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 AC091903.1-201ENST00000624322 454 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 AC138393.1-206ENST00000540997 1886 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 AC104446.1-201ENST00000613728 1321 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 AC000403.1-201ENST00000613696 3585 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SCN11AQ9UI33 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
SCN11AQ9UI33 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.89□□□□□ -1.79
SCN11AQ9UI33 MIR708-201ENST00000390708 88 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 DUTP6-201ENST00000425573 462 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 RN7SL20P-201ENST00000488827 297 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 HIGD1AP13-201ENST00000509878 289 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 OR5G4P-201ENST00000525251 760 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.89□□□□□ -1.79
SCN11AQ9UI33 MIR4769-201ENST00000584126 77 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.89□□□□□ -1.79
SCN11AQ9UI33 AC245100.7-201ENST00000609678 442 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 RMST_8.1-201ENST00000610287 165 ntBASIC3.89□□□□□ -1.79
SCN11AQ9UI33 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SCN11AQ9UI33 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SCN11AQ9UI33 AL031985.3-201ENST00000565390 2449 ntBASIC3.88□□□□□ -1.79
SCN11AQ9UI33 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCN11AQ9UI33 AC107027.3-201ENST00000565095 3473 ntBASIC3.88□□□□□ -1.79
SCN11AQ9UI33 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCN11AQ9UI33 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SCN11AQ9UI33 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.88□□□□□ -1.79
SCN11AQ9UI33 AC127526.1-201ENST00000417526 366 ntBASIC3.88□□□□□ -1.79
SCN11AQ9UI33 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.88□□□□□ -1.79
SCN11AQ9UI33 AC108078.3-201ENST00000502633 489 ntBASIC3.88□□□□□ -1.79
SCN11AQ9UI33 AC021146.1-201ENST00000511202 716 ntBASIC3.88□□□□□ -1.79
SCN11AQ9UI33 FABP5P12-201ENST00000515543 389 ntBASIC3.88□□□□□ -1.79
SCN11AQ9UI33 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SCN11AQ9UI33 AL359693.1-201ENST00000614959 2407 ntBASIC3.87□□□□□ -1.79
SCN11AQ9UI33 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.87□□□□□ -1.79
SCN11AQ9UI33 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SCN11AQ9UI33 OR5J1P-201ENST00000313544 939 ntBASIC3.87□□□□□ -1.79
SCN11AQ9UI33 XGY1-201ENST00000381172 446 ntBASIC3.87□□□□□ -1.79
SCN11AQ9UI33 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.87□□□□□ -1.79
SCN11AQ9UI33 SETP10-201ENST00000424368 814 ntBASIC3.87□□□□□ -1.79
SCN11AQ9UI33 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SCN11AQ9UI33 AC093755.1-201ENST00000512950 1023 ntBASIC3.87□□□□□ -1.79
SCN11AQ9UI33 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.87□□□□□ -1.79
SCN11AQ9UI33 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.87□□□□□ -1.79
SCN11AQ9UI33 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.87□□□□□ -1.79
SCN11AQ9UI33 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.87□□□□□ -1.79
SCN11AQ9UI33 AC007619.2-201ENST00000605743 379 ntBASIC3.87□□□□□ -1.79
SCN11AQ9UI33 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.87□□□□□ -1.79
SCN11AQ9UI33 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SCN11AQ9UI33 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
SCN11AQ9UI33 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SCN11AQ9UI33 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SCN11AQ9UI33 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SCN11AQ9UI33 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.87□□□□□ -1.79
SCN11AQ9UI33 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SCN11AQ9UI33 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 RPL7P26-201ENST00000333817 754 ntBASIC3.86□□□□□ -1.79
SCN11AQ9UI33 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 BX276092.4-201ENST00000452056 248 ntBASIC3.86□□□□□ -1.79
SCN11AQ9UI33 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 RNA5SP367-201ENST00000516557 118 ntBASIC3.86□□□□□ -1.79
SCN11AQ9UI33 COX6B1P6-201ENST00000522347 255 ntBASIC3.86□□□□□ -1.79
SCN11AQ9UI33 HMGB1P6-201ENST00000569046 646 ntBASIC3.86□□□□□ -1.79
SCN11AQ9UI33 AL137790.1-201ENST00000634283 177 ntBASIC3.86□□□□□ -1.79
SCN11AQ9UI33 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 AL136360.1-201ENST00000503377 1900 ntBASIC3.86□□□□□ -1.79
SCN11AQ9UI33 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 RNU4-82P-201ENST00000362443 140 ntBASIC3.86□□□□□ -1.79
SCN11AQ9UI33 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 RPS17P11-201ENST00000474297 293 ntBASIC3.86□□□□□ -1.79
SCN11AQ9UI33 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.86□□□□□ -1.79
SCN11AQ9UI33 ELL2P4-201ENST00000446870 1376 ntBASIC3.86□□□□□ -1.79
SCN11AQ9UI33 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SCN11AQ9UI33 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SCN11AQ9UI33 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SCN11AQ9UI33 OR56A5-201ENST00000340110 738 ntBASIC3.85□□□□□ -1.79
SCN11AQ9UI33 RN7SKP222-201ENST00000410651 315 ntBASIC3.85□□□□□ -1.79
SCN11AQ9UI33 AC019097.1-201ENST00000424783 735 ntBASIC3.85□□□□□ -1.79
SCN11AQ9UI33 NIPA2P5-201ENST00000452282 464 ntBASIC3.85□□□□□ -1.79
SCN11AQ9UI33 AL109933.2-201ENST00000452651 260 ntBASIC3.85□□□□□ -1.79
SCN11AQ9UI33 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SCN11AQ9UI33 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.85□□□□□ -1.79
SCN11AQ9UI33 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.85□□□□□ -1.79
SCN11AQ9UI33 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.85□□□□□ -1.79
SCN11AQ9UI33 EIF5A2P1-201ENST00000564027 460 ntBASIC3.85□□□□□ -1.79
SCN11AQ9UI33 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SCN11AQ9UI33 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SCN11AQ9UI33 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms