Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 CST9LP2-201ENST00000437612 320 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 RPL7P48-201ENST00000461513 746 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 RPL32P34-201ENST00000486380 400 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 RN7SKP132-201ENST00000516001 208 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 SCARNA13-201ENST00000516672 275 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 VN1R92P-201ENST00000598511 928 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 AC011492.1-201ENST00000600023 315 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.03□□□□□ -1.93
CCDC88CQ9P219 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
CCDC88CQ9P219 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 MTCO1P45-201ENST00000431457 267 ntBASIC3.02□□□□□ -1.93
CCDC88CQ9P219 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 IFNWP4-201ENST00000453148 294 ntBASIC3.02□□□□□ -1.93
CCDC88CQ9P219 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 RN7SL330P-201ENST00000469709 307 ntBASIC3.02□□□□□ -1.93
CCDC88CQ9P219 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 IGKV2-23-201ENST00000518729 323 ntBASIC3.02□□□□□ -1.93
CCDC88CQ9P219 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 AL451142.2-201ENST00000429076 2090 ntBASIC3.02□□□□□ -1.93
CCDC88CQ9P219 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 AC009302.1-201ENST00000417147 390 ntBASIC3.02□□□□□ -1.93
CCDC88CQ9P219 SEC63P1-201ENST00000425785 1258 ntBASIC3.02□□□□□ -1.93
CCDC88CQ9P219 BTG3P1-201ENST00000435859 716 ntBASIC3.02□□□□□ -1.93
CCDC88CQ9P219 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 RPS27P29-201ENST00000463110 252 ntBASIC3.02□□□□□ -1.93
CCDC88CQ9P219 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 AC119751.5-201ENST00000514077 770 ntBASIC3.02□□□□□ -1.93
CCDC88CQ9P219 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC88CQ9P219 AC092868.3-201ENST00000560515 784 ntBASIC3.02□□□□□ -1.93
CCDC88CQ9P219 AC106782.4-201ENST00000568264 210 ntBASIC3.02□□□□□ -1.93
CCDC88CQ9P219 AC004241.3-201ENST00000611728 517 ntBASIC3.02□□□□□ -1.93
CCDC88CQ9P219 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
CCDC88CQ9P219 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC88CQ9P219 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC88CQ9P219 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
CCDC88CQ9P219 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CCDC88CQ9P219 RNU1-75P-201ENST00000347264 129 ntBASIC3.01□□□□□ -1.93
CCDC88CQ9P219 RNA5SP383-201ENST00000362934 120 ntBASIC3.01□□□□□ -1.93
CCDC88CQ9P219 AC234772.1-201ENST00000377927 937 ntBASIC3.01□□□□□ -1.93
CCDC88CQ9P219 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC88CQ9P219 GSTA8P-201ENST00000404253 637 ntBASIC3.01□□□□□ -1.93
CCDC88CQ9P219 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.01□□□□□ -1.93
CCDC88CQ9P219 AC245291.1-201ENST00000419501 328 ntBASIC3.01□□□□□ -1.93
CCDC88CQ9P219 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC88CQ9P219 GTF2IP23-201ENST00000423746 351 ntBASIC3.01□□□□□ -1.93
CCDC88CQ9P219 UBE2V1P1-201ENST00000430836 445 ntBASIC3.01□□□□□ -1.93
CCDC88CQ9P219 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC88CQ9P219 AL645939.1-201ENST00000453429 797 ntBASIC3.01□□□□□ -1.93
CCDC88CQ9P219 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC88CQ9P219 RPS4XP13-201ENST00000483219 789 ntBASIC3.01□□□□□ -1.93
CCDC88CQ9P219 AC108078.3-201ENST00000502633 489 ntBASIC3.01□□□□□ -1.93
CCDC88CQ9P219 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC88CQ9P219 AC245166.1-201ENST00000521012 253 ntBASIC3.01□□□□□ -1.93
CCDC88CQ9P219 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC88CQ9P219 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC88CQ9P219 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CCDC88CQ9P219 MTND5P24-201ENST00000438892 1767 ntBASIC3.01□□□□□ -1.93
CCDC88CQ9P219 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC88CQ9P219 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
CCDC88CQ9P219 AL592494.2-201ENST00000425455 1548 ntBASIC3.01□□□□□ -1.93
CCDC88CQ9P219 ZNF542P-204ENST00000482727 1305 ntBASIC3.01□□□□□ -1.93
CCDC88CQ9P219 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC88CQ9P219 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC88CQ9P219 RNA5SP105-201ENST00000391123 113 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 NCSTNP1-201ENST00000406229 144 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 AC098592.2-201ENST00000413158 265 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3□□□□□ -1.93
CCDC88CQ9P219 HSFY1P1-201ENST00000423928 1178 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 B3GNT2P1-201ENST00000434960 952 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3□□□□□ -1.93
CCDC88CQ9P219 AC125238.1-201ENST00000448842 249 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3□□□□□ -1.93
CCDC88CQ9P219 SEPT7P6-201ENST00000469999 1143 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 AP000926.1-201ENST00000479573 241 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 HAUS1P1-201ENST00000505275 832 ntBASIC3□□□□□ -1.93
CCDC88CQ9P219 AC111000.5-201ENST00000506559 1178 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms