Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC098826.2-201ENST00000452011 651 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 RNU6-1218P-201ENST00000458990 108 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 RPL23AP14-201ENST00000468281 468 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC010627.1-201ENST00000503819 1294 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC091951.3-201ENST00000504093 246 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC008958.1-201ENST00000511047 682 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 ARL2BPP6-201ENST00000512757 439 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC099522.1-202ENST00000514718 367 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AP001922.4-201ENST00000526967 290 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 OR4C2P-201ENST00000530855 1064 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC090751.1-201ENST00000566966 267 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AP001542.2-201ENST00000593141 364 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AL357094.1-201ENST00000603845 844 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AL035411.2-201ENST00000604022 421 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC002487.1-201ENST00000604565 994 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC009464.1-201ENST00000615731 469 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 MIR92A2-201ENST00000385299 75 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 NRBF2P2-201ENST00000413087 861 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 KRR1P1-201ENST00000419430 803 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AC005005.2-201ENST00000420779 380 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AL513175.2-201ENST00000422071 443 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AC092832.1-201ENST00000422934 400 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 UBE2V1P5-201ENST00000440070 405 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AC002542.1-201ENST00000440683 193 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 RPS7P5-201ENST00000441482 581 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 RPS4XP4-201ENST00000443195 763 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 HMGB3P6-201ENST00000444896 598 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AC009963.2-201ENST00000453431 138 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 RPL7L1P8-201ENST00000469911 741 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 PRDX3P4-201ENST00000470828 747 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AL161747.1-201ENST00000480068 358 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 TRBV12-2-201ENST00000489763 344 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AC026784.1-201ENST00000507986 352 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 PRELID3BP5-201ENST00000508612 460 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 OR7H2P-201ENST00000513483 306 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 TVP23BP1-201ENST00000557500 617 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AC115085.1-201ENST00000588924 229 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 VN1R83P-201ENST00000595685 445 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AC092106.3-201ENST00000611308 722 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 AC116563.2-201ENST00000624751 535 ntBASIC3.76□□□□□ -1.81
NDE1Q9NXR1 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.76□□□□□ -1.81
NDE1Q9NXR1 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms