Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CHD8Q9HCK8 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CHD8Q9HCK8 MIR9-1-201ENST00000385198 89 ntBASIC2.93□□□□□ -1.94
CHD8Q9HCK8 HMGN2P3-201ENST00000433603 273 ntBASIC2.93□□□□□ -1.94
CHD8Q9HCK8 HMGN2P5-201ENST00000436882 273 ntBASIC2.93□□□□□ -1.94
CHD8Q9HCK8 RPS3P1-201ENST00000456781 192 ntBASIC2.93□□□□□ -1.94
CHD8Q9HCK8 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CHD8Q9HCK8 AC093010.3-201ENST00000570269 15214 ntBASIC2.93□□□□□ -1.94
CHD8Q9HCK8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHD8Q9HCK8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.93□□□□□ -1.94
CHD8Q9HCK8 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHD8Q9HCK8 AC017002.4-201ENST00000604721 1525 ntBASIC2.93□□□□□ -1.94
CHD8Q9HCK8 RNU4-26P-201ENST00000410270 107 ntBASIC2.93□□□□□ -1.94
CHD8Q9HCK8 USP9YP6-201ENST00000413550 854 ntBASIC2.93□□□□□ -1.94
CHD8Q9HCK8 USP9YP34-201ENST00000453983 808 ntBASIC2.93□□□□□ -1.94
CHD8Q9HCK8 FCF1P3-201ENST00000496394 590 ntBASIC2.93□□□□□ -1.94
CHD8Q9HCK8 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.93□□□□□ -1.94
CHD8Q9HCK8 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHD8Q9HCK8 CYP4A43P-201ENST00000568156 121 ntBASIC2.93□□□□□ -1.94
CHD8Q9HCK8 AL157817.1-201ENST00000614264 790 ntBASIC2.93□□□□□ -1.94
CHD8Q9HCK8 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHD8Q9HCK8 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHD8Q9HCK8 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHD8Q9HCK8 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.92□□□□□ -1.94
CHD8Q9HCK8 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.92□□□□□ -1.94
CHD8Q9HCK8 AC107081.1-201ENST00000414975 361 ntBASIC2.92□□□□□ -1.94
CHD8Q9HCK8 AL139415.2-201ENST00000431968 163 ntBASIC2.92□□□□□ -1.94
CHD8Q9HCK8 TPT1P1-201ENST00000458495 518 ntBASIC2.92□□□□□ -1.94
CHD8Q9HCK8 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC2.92□□□□□ -1.94
CHD8Q9HCK8 AC015871.2-201ENST00000603605 948 ntBASIC2.92□□□□□ -1.94
CHD8Q9HCK8 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CHD8Q9HCK8 OR5BR1P-201ENST00000524992 1330 ntBASIC2.92□□□□□ -1.94
CHD8Q9HCK8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHD8Q9HCK8 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHD8Q9HCK8 AC009487.2-201ENST00000420969 6821 ntBASIC2.92□□□□□ -1.94
CHD8Q9HCK8 AL359643.1-201ENST00000404109 423 ntBASIC2.92□□□□□ -1.94
CHD8Q9HCK8 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHD8Q9HCK8 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC2.92□□□□□ -1.94
CHD8Q9HCK8 RPS4XP22-201ENST00000480755 780 ntBASIC2.92□□□□□ -1.94
CHD8Q9HCK8 AC109329.2-201ENST00000519658 482 ntBASIC2.92□□□□□ -1.94
CHD8Q9HCK8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.92□□□□□ -1.94
CHD8Q9HCK8 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.92□□□□□ -1.94
CHD8Q9HCK8 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHD8Q9HCK8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
CHD8Q9HCK8 AC009977.1-201ENST00000586015 570 ntBASIC2.92□□□□□ -1.94
CHD8Q9HCK8 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC2.92□□□□□ -1.94
CHD8Q9HCK8 NTAN1P1-201ENST00000603150 646 ntBASIC2.92□□□□□ -1.94
CHD8Q9HCK8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CHD8Q9HCK8 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 MTCO3P21-201ENST00000430791 643 ntBASIC2.91□□□□□ -1.94
CHD8Q9HCK8 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.91□□□□□ -1.94
CHD8Q9HCK8 AC104687.1-201ENST00000485829 412 ntBASIC2.91□□□□□ -1.94
CHD8Q9HCK8 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 RNA5SP61-201ENST00000516453 100 ntBASIC2.91□□□□□ -1.94
CHD8Q9HCK8 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 AC099489.2-201ENST00000574976 260 ntBASIC2.91□□□□□ -1.94
CHD8Q9HCK8 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 AC023043.2-201ENST00000589678 1026 ntBASIC2.91□□□□□ -1.94
CHD8Q9HCK8 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 AC004520.1-201ENST00000608362 1413 ntBASIC2.91□□□□□ -1.94
CHD8Q9HCK8 OR4G1P-202ENST00000641173 1788 ntBASIC2.91□□□□□ -1.94
CHD8Q9HCK8 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 RNY1P10-201ENST00000363268 113 ntBASIC2.91□□□□□ -1.94
CHD8Q9HCK8 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 AC074367.1-201ENST00000438685 1125 ntBASIC2.91□□□□□ -1.94
CHD8Q9HCK8 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 AC026333.2-201ENST00000542164 106 ntBASIC2.91□□□□□ -1.94
CHD8Q9HCK8 DUXAP6-201ENST00000553858 601 ntBASIC2.91□□□□□ -1.94
CHD8Q9HCK8 AL359219.2-201ENST00000555184 348 ntBASIC2.91□□□□□ -1.94
CHD8Q9HCK8 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 AL392112.1-201ENST00000605115 829 ntBASIC2.91□□□□□ -1.94
CHD8Q9HCK8 AC015849.2-201ENST00000605738 409 ntBASIC2.91□□□□□ -1.94
CHD8Q9HCK8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
CHD8Q9HCK8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.9□□□□□ -1.94
CHD8Q9HCK8 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
CHD8Q9HCK8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CHD8Q9HCK8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC2.9□□□□□ -1.94
CHD8Q9HCK8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CHD8Q9HCK8 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.9□□□□□ -1.94
CHD8Q9HCK8 RNU6-851P-201ENST00000384565 107 ntBASIC2.9□□□□□ -1.94
CHD8Q9HCK8 SNORD67-201ENST00000390833 111 ntBASIC2.9□□□□□ -1.94
CHD8Q9HCK8 U3.42-201ENST00000408746 214 ntBASIC2.9□□□□□ -1.94
CHD8Q9HCK8 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.9□□□□□ -1.94
CHD8Q9HCK8 MOB1AP1-201ENST00000430903 535 ntBASIC2.9□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms