Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RBM43P1-201ENST00000476891 1081 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AC021382.1-201ENST00000483523 359 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 COX7A2P2-201ENST00000505291 250 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 NPM1P41-201ENST00000512920 831 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 RNA5SP34-201ENST00000516887 130 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 MIR4311-201ENST00000580794 100 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 MIR4472-2-201ENST00000582069 67 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 UBE2L4-201ENST00000587688 464 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AC006272.2-201ENST00000594725 163 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AL606834.2-201ENST00000602954 668 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AC245014.2-201ENST00000603689 287 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AC246785.4-201ENST00000605374 287 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AP003117.2-201ENST00000606010 545 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AL158801.5-201ENST00000623123 465 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AC079597.1-201ENST00000624306 508 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AC091925.2-201ENST00000625059 256 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 ELF2P3-201ENST00000445099 1506 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 SMG1P4-204ENST00000523028 4131 ntBASIC5.46□□□□□ -1.53
TRIM55Q9BYV6 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
TRIM55Q9BYV6 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM55Q9BYV6 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.46□□□□□ -1.53
TRIM55Q9BYV6 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM55Q9BYV6 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 PCAT14-202ENST00000627127 3935 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 RNU6-1283P-201ENST00000365314 105 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 MIR105-2-201ENST00000385083 81 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 CCNG1P1-201ENST00000406783 885 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 OR6E1P-201ENST00000414424 923 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 PIGFP2-201ENST00000421400 651 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 MTND4LP11-201ENST00000422184 280 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 USP9YP18-201ENST00000425912 695 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AL049734.2-201ENST00000441066 616 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 MRPL48P1-201ENST00000445390 636 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AC104308.1-201ENST00000454621 333 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 UBA52P7-201ENST00000486088 380 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 RN7SL184P-201ENST00000488308 297 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 RPL23AP72-201ENST00000492447 435 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AC108693.1-201ENST00000496068 432 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 IGBP1P4-201ENST00000503202 879 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 HMGN1P9-201ENST00000515212 298 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AP003497.1-201ENST00000528472 562 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AL390334.1-201ENST00000556395 450 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AL355472.4-201ENST00000610233 626 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 BX664608.1-201ENST00000610519 487 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AC006329.2-201ENST00000611491 394 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AC040168.1-201ENST00000623594 991 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AP000843.1-201ENST00000624880 701 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 MIR6863-201ENST00000636112 90 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AC104260.2-201ENST00000623551 3497 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM55Q9BYV6 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms