Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 HMGB3P8-201ENST00000449709 577 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 CFTRP1-201ENST00000456646 183 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 MTND2P39-201ENST00000457230 764 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 TMED11P-201ENST00000479478 690 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AC005726.1-201ENST00000494679 427 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 SETP12-201ENST00000514068 805 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 SEC11B-201ENST00000518383 499 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AC026403.1-201ENST00000518938 295 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AP000926.4-201ENST00000527351 454 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 MTND5P21-201ENST00000531961 522 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 OR4H6P-202ENST00000603819 340 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AC007179.3-201ENST00000604976 235 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AL365400.2-201ENST00000605604 902 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AC019131.2-201ENST00000609071 870 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AF117829.1-206ENST00000621883 3802 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AL356490.1-201ENST00000623079 479 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AL138960.2-201ENST00000625145 535 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AC127502.3-201ENST00000636170 1206 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 AC032011.1-201ENST00000611703 1549 ntBASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RSPO3Q9BXY4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 AP001148.1-201ENST00000624124 2359 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 RNA5SP197-201ENST00000363357 119 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 SNORA27.3-201ENST00000364937 134 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 OR6K3-202ENST00000368146 996 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 MT-TP-201ENST00000387461 68 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 SNORD17-201ENST00000390930 237 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 CCNB2P1-201ENST00000399411 1150 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 RNU2-37P-201ENST00000410695 177 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 Z99755.1-201ENST00000414048 380 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 Z99127.2-201ENST00000441426 334 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 CALM1P2-201ENST00000452941 448 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 RBMY2UP-201ENST00000453474 324 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 AL049830.2-201ENST00000480072 201 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 MTND3P3-201ENST00000505004 126 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 RNU6-491P-201ENST00000516099 110 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 RNU1-95P-201ENST00000516357 160 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 RNU1-128P-201ENST00000516704 160 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 MIR5047-201ENST00000579212 100 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 AC017100.2-201ENST00000584628 355 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 AL158211.2-201ENST00000607282 395 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 AP006248.3-201ENST00000623580 594 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 AC145207.9-201ENST00000623802 325 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 U6.98-201ENST00000637157 84 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 ZNF285B-201ENST00000561698 1767 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 AL645937.1-201ENST00000641739 1652 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 DCAF13P1-201ENST00000495256 1330 ntBASIC3.17□□□□□ -1.9
RSPO3Q9BXY4 AC073346.2-201ENST00000624724 2058 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 SNORA73.2-201ENST00000364946 201 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 RNU6-40P-201ENST00000384254 107 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 RSL24D1P1-201ENST00000404972 493 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 RANP4-201ENST00000413361 655 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 GLRXP1-201ENST00000423261 334 ntBASIC3.16□□□□□ -1.9
RSPO3Q9BXY4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms