Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 U6.112-201ENST00000384129 70 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 MIR30B-201ENST00000384850 88 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 PRRC2CP1-201ENST00000404428 159 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 MTHFD2P2-201ENST00000407725 247 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 SNORA3.3-201ENST00000408712 125 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 MTND4P22-201ENST00000413116 1169 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 PAICSP7-201ENST00000419829 962 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AC241520.1-201ENST00000422654 1099 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 RPL37P1-201ENST00000432310 284 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 OR4C10P-201ENST00000434991 931 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 HMGB1P48-201ENST00000446155 598 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 MTND2P39-201ENST00000457230 764 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 TPT1P3-201ENST00000492841 512 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 HMGB1P21-201ENST00000502313 581 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AC026784.1-201ENST00000507986 352 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 HPRT1P1-201ENST00000509498 657 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AC104108.1-201ENST00000509930 412 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AP006245.1-201ENST00000522549 120 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AC006518.2-201ENST00000542513 940 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AL161713.1-201ENST00000555538 145 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AC126365.2-201ENST00000580630 379 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AL020997.3-201ENST00000602843 359 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AC006077.1-201ENST00000604746 343 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AL592295.2-201ENST00000612578 206 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AL049777.1-201ENST00000622740 518 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 BX649567.1-201ENST00000642071 1134 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 AC073055.1-201ENST00000456901 1621 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 SNORA62-201ENST00000365493 153 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AC069282.1-201ENST00000411911 526 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AC246680.2-201ENST00000422106 389 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AL591419.1-201ENST00000427423 339 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 BMS1P19-201ENST00000433925 393 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 SDR42E1P3-201ENST00000438345 502 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AC114755.5-201ENST00000447760 831 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AC010655.1-201ENST00000449336 292 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 ANP32BP2-201ENST00000454525 545 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AC018635.1-201ENST00000468292 1030 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 USP9YP5-201ENST00000511770 630 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 RN7SKP122-201ENST00000515923 296 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 OR8I1P-201ENST00000529291 931 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AL442163.2-201ENST00000553912 710 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 MIR4425-201ENST00000580572 84 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AC008687.2-201ENST00000597865 520 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AC099785.1-201ENST00000605697 437 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AP002802.2-201ENST00000605877 235 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AC112503.1-201ENST00000608436 391 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AP004247.3-201ENST00000608682 624 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 RMST_8.1-201ENST00000610287 165 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 MIR6864-201ENST00000617935 70 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AL357559.1-201ENST00000622228 274 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AL732618.1-201ENST00000623251 301 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AC126544.2-201ENST00000625174 749 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 AC068647.1-201ENST00000489539 2265 ntBASIC3.03□□□□□ -1.92
HDHD3Q9BSH5 SAGE4P-201ENST00000442271 3381 ntBASIC3.03□□□□□ -1.93
HDHD3Q9BSH5 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
HDHD3Q9BSH5 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.03□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms