Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USB1Q9BQ65 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USB1Q9BQ65 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USB1Q9BQ65 AL391987.6-201ENST00000305671 199 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USB1Q9BQ65 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
USB1Q9BQ65 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USB1Q9BQ65 Y_RNA.54-201ENST00000362766 105 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 RN7SKP174-201ENST00000363803 330 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 RN7SKP55-201ENST00000364888 307 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 Y_RNA.352-201ENST00000365439 102 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USB1Q9BQ65 SNRPEP6-201ENST00000407465 277 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 Y_RNA.793-201ENST00000411222 111 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USB1Q9BQ65 AC096920.1-201ENST00000423991 241 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 AC134879.1-201ENST00000426062 394 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
USB1Q9BQ65 GNL2P1-201ENST00000451274 2190 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6.29□□□□□ -1.4
USB1Q9BQ65 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC6.29□□□□□ -1.4
USB1Q9BQ65 AC110792.1-201ENST00000491826 472 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USB1Q9BQ65 Y_RNA.689-201ENST00000516589 107 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 AC109329.1-201ENST00000518744 317 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.29□□□□□ -1.4
USB1Q9BQ65 AC104576.1-201ENST00000524225 88 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.29□□□□□ -1.4
USB1Q9BQ65 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.29□□□□□ -1.4
USB1Q9BQ65 AC013283.1-201ENST00000557282 492 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.29□□□□□ -1.4
USB1Q9BQ65 MIR3159-201ENST00000584572 74 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 AC015801.1-201ENST00000585651 153 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 AC012119.1-201ENST00000603184 222 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 AL512652.1-201ENST00000619006 500 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 AC110801.1-201ENST00000623590 212 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 AC087894.3-201ENST00000623682 349 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.29□□□□□ -1.4
USB1Q9BQ65 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
USB1Q9BQ65 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USB1Q9BQ65 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.29□□□□□ -1.4
USB1Q9BQ65 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.29□□□□□ -1.4
USB1Q9BQ65 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.29□□□□□ -1.4
USB1Q9BQ65 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
USB1Q9BQ65 AC083837.1-201ENST00000565297 2994 ntBASIC6.29□□□□□ -1.4
USB1Q9BQ65 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.29□□□□□ -1.4
USB1Q9BQ65 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.29□□□□□ -1.4
USB1Q9BQ65 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
USB1Q9BQ65 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
USB1Q9BQ65 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
USB1Q9BQ65 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
USB1Q9BQ65 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
USB1Q9BQ65 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
USB1Q9BQ65 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 AL603910.2-201ENST00000407268 136 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 PPIAP23-201ENST00000420099 497 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 RPS12P5-201ENST00000423449 371 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 PHB2P1-201ENST00000434943 890 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 CYCSP44-201ENST00000448560 313 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 AC091180.1-201ENST00000462104 372 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 RN7SL149P-201ENST00000465197 281 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 AC053481.1-201ENST00000467217 306 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 TUBBP11-201ENST00000472255 252 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 AC098869.1-201ENST00000481627 292 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 SNORA31.6-201ENST00000516241 130 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 Y_RNA.687-201ENST00000516558 91 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 AC034114.1-201ENST00000520293 285 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 AC130366.1-201ENST00000526505 1192 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 AC009852.2-201ENST00000567898 485 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 MIR3135A-201ENST00000578460 77 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
USB1Q9BQ65 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
USB1Q9BQ65 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 IRF5P1-201ENST00000504852 2164 ntBASIC6.28□□□□□ -1.4
USB1Q9BQ65 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
USB1Q9BQ65 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
USB1Q9BQ65 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
USB1Q9BQ65 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
USB1Q9BQ65 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
USB1Q9BQ65 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
USB1Q9BQ65 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms