Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.22□□□□□ -1.73
PKP4Q99569 AC090281.1-201ENST00000523019 276 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PKP4Q99569 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.22□□□□□ -1.73
PKP4Q99569 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.22□□□□□ -1.73
PKP4Q99569 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.22□□□□□ -1.73
PKP4Q99569 AC135628.1-201ENST00000568867 534 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.22□□□□□ -1.73
PKP4Q99569 AC091488.1-201ENST00000604239 660 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 AL354984.3-201ENST00000604803 325 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.22□□□□□ -1.73
PKP4Q99569 AC013562.2-201ENST00000611632 603 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 AL354976.1-201ENST00000613843 387 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 AC007546.1-201ENST00000619452 559 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 AL157770.1-201ENST00000623049 439 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 AC055839.1-201ENST00000634467 498 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 MIR4496-201ENST00000635896 61 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PKP4Q99569 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PKP4Q99569 MTCO1P14-201ENST00000441695 1559 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.22□□□□□ -1.73
PKP4Q99569 NOL8P1-201ENST00000508336 3529 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.22□□□□□ -1.73
PKP4Q99569 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PKP4Q99569 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PKP4Q99569 DCAF13P1-201ENST00000495256 1330 ntBASIC4.21□□□□□ -1.73
PKP4Q99569 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.21□□□□□ -1.73
PKP4Q99569 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
PKP4Q99569 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
PKP4Q99569 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PKP4Q99569 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PKP4Q99569 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PKP4Q99569 AC067945.1-201ENST00000342609 618 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.21□□□□□ -1.74
PKP4Q99569 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
PKP4Q99569 RNU6-356P-201ENST00000384140 107 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 AL079342.2-201ENST00000403367 482 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.21□□□□□ -1.74
PKP4Q99569 VN1R8P-201ENST00000407739 893 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 AL031779.1-201ENST00000415663 330 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.21□□□□□ -1.74
PKP4Q99569 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.21□□□□□ -1.74
PKP4Q99569 AC011233.1-201ENST00000422812 283 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 RPS29P17-201ENST00000430795 166 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.21□□□□□ -1.74
PKP4Q99569 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.21□□□□□ -1.74
PKP4Q99569 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.21□□□□□ -1.74
PKP4Q99569 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PKP4Q99569 RPL29P29-201ENST00000448725 423 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 MRPL42P4-201ENST00000453267 443 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 snoU13.7-201ENST00000459220 104 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 AC092754.2-201ENST00000463506 460 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 AC015724.1-201ENST00000478577 156 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.21□□□□□ -1.74
PKP4Q99569 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PKP4Q99569 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PKP4Q99569 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.21□□□□□ -1.74
PKP4Q99569 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.21□□□□□ -1.74
PKP4Q99569 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.21□□□□□ -1.74
PKP4Q99569 AC008694.2-201ENST00000517591 306 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.21□□□□□ -1.74
PKP4Q99569 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.21□□□□□ -1.74
PKP4Q99569 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.21□□□□□ -1.74
PKP4Q99569 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.21□□□□□ -1.74
PKP4Q99569 AC010198.2-201ENST00000550612 259 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PKP4Q99569 AADACP1-206ENST00000561502 1193 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.21□□□□□ -1.74
PKP4Q99569 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PKP4Q99569 AL356218.2-201ENST00000605264 187 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 AC124312.4-201ENST00000605533 310 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 AC008121.2-201ENST00000614647 523 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 AC009237.17-201ENST00000618111 748 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 VN1R7P-201ENST00000619242 903 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 AC073530.2-201ENST00000623987 261 ntBASIC4.21□□□□□ -1.74
PKP4Q99569 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.21□□□□□ -1.74
PKP4Q99569 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PKP4Q99569 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.21□□□□□ -1.74
PKP4Q99569 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PKP4Q99569 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PKP4Q99569 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PKP4Q99569 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PKP4Q99569 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.21□□□□□ -1.74
PKP4Q99569 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PKP4Q99569 AC095050.2-201ENST00000510748 1458 ntBASIC4.2□□□□□ -1.74
PKP4Q99569 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PKP4Q99569 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.2□□□□□ -1.74
PKP4Q99569 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PKP4Q99569 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PKP4Q99569 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PKP4Q99569 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PKP4Q99569 XIAPP3-201ENST00000312918 795 ntBASIC4.2□□□□□ -1.74
PKP4Q99569 RNU1-32P-201ENST00000363937 159 ntBASIC4.2□□□□□ -1.74
PKP4Q99569 SNORA56-201ENST00000383966 129 ntBASIC4.2□□□□□ -1.74
PKP4Q99569 Y_RNA.505-201ENST00000384489 102 ntBASIC4.2□□□□□ -1.74
PKP4Q99569 LAP3P1-201ENST00000403648 294 ntBASIC4.2□□□□□ -1.74
PKP4Q99569 Y_RNA.625-201ENST00000411256 107 ntBASIC4.2□□□□□ -1.74
PKP4Q99569 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms