Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RPL21P24-201ENST00000413752 448 ntBASIC6.79□□□□□ -1.32
PHOX2BQ99453 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC6.79□□□□□ -1.32
PHOX2BQ99453 AC243428.1-201ENST00000421099 264 ntBASIC6.79□□□□□ -1.32
PHOX2BQ99453 AC097713.2-201ENST00000430199 356 ntBASIC6.79□□□□□ -1.32
PHOX2BQ99453 USP9YP30-201ENST00000430729 455 ntBASIC6.79□□□□□ -1.32
PHOX2BQ99453 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.79□□□□□ -1.32
PHOX2BQ99453 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.79□□□□□ -1.32
PHOX2BQ99453 AC090686.1-201ENST00000481577 749 ntBASIC6.79□□□□□ -1.32
PHOX2BQ99453 FTH1P24-201ENST00000503502 462 ntBASIC6.79□□□□□ -1.32
PHOX2BQ99453 IGKV3D-25-201ENST00000519599 235 ntBASIC6.79□□□□□ -1.32
PHOX2BQ99453 AP003385.6-201ENST00000531603 374 ntBASIC6.79□□□□□ -1.32
PHOX2BQ99453 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
PHOX2BQ99453 SETP7-201ENST00000552169 453 ntBASIC6.79□□□□□ -1.32
PHOX2BQ99453 AC026956.1-201ENST00000558741 396 ntBASIC6.79□□□□□ -1.32
PHOX2BQ99453 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC6.79□□□□□ -1.32
PHOX2BQ99453 AL355812.1-201ENST00000603215 216 ntBASIC6.79□□□□□ -1.32
PHOX2BQ99453 AC025588.3-201ENST00000604182 274 ntBASIC6.79□□□□□ -1.32
PHOX2BQ99453 AC011626.1-201ENST00000604710 562 ntBASIC6.79□□□□□ -1.32
PHOX2BQ99453 AL451044.1-201ENST00000604867 238 ntBASIC6.79□□□□□ -1.32
PHOX2BQ99453 AC103858.2-201ENST00000621471 543 ntBASIC6.79□□□□□ -1.32
PHOX2BQ99453 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PHOX2BQ99453 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.79□□□□□ -1.32
PHOX2BQ99453 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
PHOX2BQ99453 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PHOX2BQ99453 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
PHOX2BQ99453 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PHOX2BQ99453 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PHOX2BQ99453 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
PHOX2BQ99453 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
PHOX2BQ99453 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PHOX2BQ99453 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PHOX2BQ99453 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PHOX2BQ99453 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PHOX2BQ99453 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PHOX2BQ99453 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PHOX2BQ99453 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
PHOX2BQ99453 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 CUBNP3-201ENST00000457461 1784 ntBASIC6.78□□□□□ -1.32
PHOX2BQ99453 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 Y_RNA.485-201ENST00000384395 102 ntBASIC6.78□□□□□ -1.32
PHOX2BQ99453 RNU6-1055P-201ENST00000391085 107 ntBASIC6.78□□□□□ -1.32
PHOX2BQ99453 RNU4-65P-201ENST00000410473 140 ntBASIC6.78□□□□□ -1.32
PHOX2BQ99453 RNA5SP111-201ENST00000411386 101 ntBASIC6.78□□□□□ -1.32
PHOX2BQ99453 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 UBE2V1P4-201ENST00000425374 344 ntBASIC6.78□□□□□ -1.32
PHOX2BQ99453 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 EEF1A1P1-201ENST00000447052 739 ntBASIC6.78□□□□□ -1.32
PHOX2BQ99453 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 CYCSP34-201ENST00000458172 304 ntBASIC6.78□□□□□ -1.32
PHOX2BQ99453 RPL31P60-201ENST00000478450 367 ntBASIC6.78□□□□□ -1.32
PHOX2BQ99453 AP001086.1-201ENST00000494882 321 ntBASIC6.78□□□□□ -1.32
PHOX2BQ99453 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 RRN3P3-201ENST00000549207 578 ntBASIC6.78□□□□□ -1.32
PHOX2BQ99453 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PHOX2BQ99453 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 AC007998.5-201ENST00000622938 237 ntBASIC6.78□□□□□ -1.32
PHOX2BQ99453 CYP4F35P-202ENST00000636121 390 ntBASIC6.78□□□□□ -1.32
PHOX2BQ99453 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PHOX2BQ99453 AC005225.5-201ENST00000623547 2225 ntBASIC6.78□□□□□ -1.32
PHOX2BQ99453 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PHOX2BQ99453 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PHOX2BQ99453 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.78□□□□□ -1.32
PHOX2BQ99453 AC007529.1-201ENST00000418574 2178 ntBASIC6.78□□□□□ -1.32
PHOX2BQ99453 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
PHOX2BQ99453 AP000866.6-201ENST00000638898 3579 ntBASIC6.78□□□□□ -1.32
PHOX2BQ99453 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PHOX2BQ99453 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
PHOX2BQ99453 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.77□□□□□ -1.32
PHOX2BQ99453 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
PHOX2BQ99453 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PHOX2BQ99453 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PHOX2BQ99453 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
PHOX2BQ99453 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PHOX2BQ99453 PROS2P-201ENST00000474651 1951 ntBASIC6.77□□□□□ -1.33
PHOX2BQ99453 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.77□□□□□ -1.33
PHOX2BQ99453 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.77□□□□□ -1.33
PHOX2BQ99453 RN7SKP115-201ENST00000363177 317 ntBASIC6.77□□□□□ -1.33
PHOX2BQ99453 RNU1-84P-201ENST00000365447 164 ntBASIC6.77□□□□□ -1.33
PHOX2BQ99453 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PHOX2BQ99453 U3.29-201ENST00000391296 212 ntBASIC6.77□□□□□ -1.33
PHOX2BQ99453 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
PHOX2BQ99453 AC096664.2-201ENST00000411843 406 ntBASIC6.77□□□□□ -1.33
PHOX2BQ99453 AC244452.1-201ENST00000413798 141 ntBASIC6.77□□□□□ -1.33
PHOX2BQ99453 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.77□□□□□ -1.33
PHOX2BQ99453 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms