Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC069218.2-201ENST00000411665 344 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 USP9YP33-201ENST00000412220 421 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 UQCRBP1-201ENST00000421129 336 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 USP9YP35-201ENST00000435696 412 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 RPL23AP16-201ENST00000441715 421 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AL122001.1-201ENST00000457027 370 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 SCARNA10-201ENST00000459255 330 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AC010468.1-201ENST00000461022 817 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 RPL7AP28-201ENST00000464513 571 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 RPS3AP43-201ENST00000479743 781 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 RPL5P23-201ENST00000496040 868 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AC007016.1-201ENST00000512110 244 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 RN7SKP82-201ENST00000516786 223 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AP005119.2-201ENST00000579735 1105 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AC069061.3-201ENST00000582254 823 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AC069304.2-201ENST00000605154 435 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AC093783.1-201ENST00000612976 329 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AC122133.1-201ENST00000613964 233 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AC005086.4-201ENST00000623065 213 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHMP4CQ96CF2 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CHMP4CQ96CF2 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHMP4CQ96CF2 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CHMP4CQ96CF2 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 ASNSP1-201ENST00000518311 1939 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 ATP5F1P4-201ENST00000397288 746 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AL450338.1-201ENST00000407987 512 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AL133384.1-201ENST00000412744 351 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 COX6CP17-201ENST00000421389 185 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 PDSS1P1-201ENST00000422953 1114 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 COX6CP15-201ENST00000426313 211 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AC092427.1-201ENST00000439177 601 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 KATNBL1P3-201ENST00000443475 909 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 DDX39BP2-208ENST00000453923 258 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 RPL18AP17-201ENST00000455326 198 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AC092757.1-201ENST00000467293 467 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 SYPL1P1-201ENST00000473622 768 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AC113430.1-201ENST00000506872 718 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AC090071.1-201ENST00000507713 644 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AC111000.2-201ENST00000507775 550 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AC117522.2-201ENST00000510049 657 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 RNU6-678P-201ENST00000516832 109 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 ZNF705CP-201ENST00000530515 889 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AC068831.4-201ENST00000556118 109 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 SLC25A36P1-201ENST00000590111 465 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 VN1R90P-201ENST00000595717 726 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AC020634.1-201ENST00000608701 549 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AL354976.1-201ENST00000613843 387 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AC009704.2-201ENST00000618739 483 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 RAD17P1-201ENST00000418130 2042 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 SAGE2P-201ENST00000420011 2126 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 ERCC6-202ENST00000374127 1782 ntBASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CHMP4CQ96CF2 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 SNORD96B-201ENST00000386148 79 ntBASIC5.38□□□□□ -1.55
CHMP4CQ96CF2 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms