Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AC136618.2-201ENST00000575091 400 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AP001004.1-201ENST00000582468 324 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 PSMA6P4-201ENST00000603247 718 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AP001521.1-201ENST00000609150 300 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 MTCO1P14-201ENST00000441695 1559 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 AL079343.1-201ENST00000572358 1771 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 SNRPEP3-201ENST00000338402 276 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 RNU1-44P-201ENST00000384453 163 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 AL109941.1-201ENST00000401925 229 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 PRELID3BP11-201ENST00000414230 479 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 UBE2V1P10-201ENST00000414685 269 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 BX510359.2-201ENST00000417920 305 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 AC008280.1-201ENST00000418851 412 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 UBTFL3-201ENST00000418934 1024 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 PDSS1P1-201ENST00000422953 1114 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 RPL37P1-201ENST00000432310 284 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 Z74696.2-201ENST00000436514 498 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 UBE2V1P3-201ENST00000439651 417 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 SSXP1-201ENST00000453640 473 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 HMGN3P1-201ENST00000453847 193 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 DNAJC19P1-201ENST00000455312 319 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 RPL23AP65-201ENST00000475608 468 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 UBTFL6-201ENST00000477929 1024 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 OR4G11P-201ENST00000492842 939 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 RNU6-405P-201ENST00000516637 110 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 RN7SKP96-201ENST00000516948 297 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 AL139174.1-201ENST00000531489 886 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 MTATP6P3-201ENST00000581686 676 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 AL160290.3-201ENST00000604869 165 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 AC211433.2-201ENST00000608433 387 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 AC093536.2-201ENST00000565257 1406 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 USP9YP4-201ENST00000424401 1745 ntBASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4AQ8WYN0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AC108467.2-201ENST00000617640 1597 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 RNU6-462P-201ENST00000362659 105 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 RNU6-723P-201ENST00000383973 107 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 MIR659-201ENST00000384963 97 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 Z98745.1-201ENST00000402553 494 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 RNU2-28P-201ENST00000410457 189 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AC073264.1-201ENST00000411508 416 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 RAD23BP1-201ENST00000421404 1227 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 NPM1P24-201ENST00000428039 894 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AL365184.2-201ENST00000431139 435 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 TRGVB-201ENST00000453257 471 ntBASIC4.67□□□□□ -1.66
ATG4AQ8WYN0 AC012158.1-204ENST00000483430 465 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms