Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL023807.1-201ENST00000407932 359 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 MIR1302-8-201ENST00000408342 128 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 AC069218.2-201ENST00000411665 344 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 OR2AH1P-201ENST00000425717 928 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 AL035407.1-201ENST00000429211 571 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 UBE2D3P4-201ENST00000441973 436 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 VN1R10P-201ENST00000447106 875 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 SYPL1P1-201ENST00000473622 768 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 AC112198.1-201ENST00000505369 1220 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 AC016065.2-201ENST00000514530 444 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 RNU6-678P-201ENST00000516832 109 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 AC068446.3-201ENST00000555285 382 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 DUXAP11-201ENST00000603858 526 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 AC008083.4-201ENST00000615076 444 ntBASIC4.54□□□□□ -1.68
HMGB4Q8WW32 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.54□□□□□ -1.68
HMGB4Q8WW32 AL445523.1-201ENST00000451184 1362 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AL122126.1-201ENST00000546905 1318 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 OR5P1P-201ENST00000299512 925 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 RNU1-94P-201ENST00000362627 173 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 RNA5SP366-201ENST00000365454 123 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 UBBP2-201ENST00000376781 231 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 SNORD116-1-201ENST00000384335 95 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 RNU6-253P-201ENST00000384730 105 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 SNRPEP2-201ENST00000397592 279 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC025750.1-201ENST00000399891 379 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 COX6CP15-201ENST00000426313 211 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC073335.1-201ENST00000427776 363 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 NPM1P34-201ENST00000428821 893 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 RPL34P6-201ENST00000432390 345 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 MTND6P18-201ENST00000439477 513 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 ARL4AP3-201ENST00000441452 574 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 RPL39P6-201ENST00000448289 150 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 USP9YP10-201ENST00000454868 628 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 TRBV26-201ENST00000456572 344 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC090686.1-201ENST00000481577 749 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC091167.1-201ENST00000492017 396 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC005178.1-201ENST00000508392 440 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 XKRY-201ENST00000510392 1100 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 LTV1P1-201ENST00000510683 1237 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 USP9YP5-201ENST00000511770 630 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 OR5BM1P-201ENST00000512021 366 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 DEFB131D-201ENST00000526803 184 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 OR7K1P-201ENST00000546439 926 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC025884.1-201ENST00000556034 378 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 CYCSP2-201ENST00000558168 301 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC106785.1-201ENST00000565935 262 ntBASIC4.53□□□□□ -1.68
HMGB4Q8WW32 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGB4Q8WW32 AC078899.5-201ENST00000612475 178 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms