Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 Z82205.1-201ENST00000428456 297 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 RNU7-152P-201ENST00000458982 64 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 UBFD1P1-201ENST00000473259 814 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 RN7SL570P-201ENST00000484405 292 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AL163540.1-201ENST00000485382 386 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC055855.1-201ENST00000489563 579 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC005726.1-201ENST00000494679 427 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 FAM206BP-201ENST00000510179 541 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 RNU6-559P-201ENST00000516151 98 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC112191.2-201ENST00000522428 333 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC011979.2-201ENST00000527568 352 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AP003497.1-201ENST00000528472 562 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 RPL21P12-201ENST00000559810 515 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 FRG2DP-202ENST00000566967 323 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC090615.1-201ENST00000577519 154 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 MIR4260-201ENST00000583107 67 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC011460.1-201ENST00000636268 1834 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC091305.2-201ENST00000624049 1576 ntBASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UBE3DQ7Z6J8 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 GTF2IP4-201ENST00000453092 2054 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 OR52B3P-201ENST00000314715 928 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 Y_RNA.367-201ENST00000365544 101 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 RNU1-136P-201ENST00000384181 164 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 MIR621-201ENST00000384919 96 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 MIR454-201ENST00000390180 115 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 AL161631.1-201ENST00000417933 486 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 MRPS21P2-201ENST00000424704 264 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 AC005297.2-201ENST00000450430 606 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 AC022431.1-201ENST00000450941 438 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 snoU13.8-201ENST00000458890 104 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 RPS23P6-201ENST00000466136 431 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 AC074255.1-201ENST00000511259 501 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 Y_RNA.718-201ENST00000517110 102 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 AC018552.3-201ENST00000567416 561 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 GLUD1P4-201ENST00000590914 418 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 AC008737.2-201ENST00000599446 118 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 XIAPP1-201ENST00000603162 600 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 AL080274.1-201ENST00000605565 220 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 NANOGP3-201ENST00000605855 286 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 AL096712.1-201ENST00000614561 159 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 AL596245.1-201ENST00000618994 362 ntBASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
UBE3DQ7Z6J8 7SK.10-201ENST00000621414 298 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms