Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.47□□□□□ -1.69
SNX30Q5VWJ9 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX30Q5VWJ9 AC023043.4-201ENST00000612081 449 ntBASIC4.47□□□□□ -1.69
SNX30Q5VWJ9 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX30Q5VWJ9 MIR4727-201ENST00000622232 55 ntBASIC4.47□□□□□ -1.69
SNX30Q5VWJ9 AC068724.3-201ENST00000625906 87 ntBASIC4.47□□□□□ -1.69
SNX30Q5VWJ9 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX30Q5VWJ9 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX30Q5VWJ9 MTCO1P24-201ENST00000515438 1558 ntBASIC4.47□□□□□ -1.69
SNX30Q5VWJ9 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX30Q5VWJ9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX30Q5VWJ9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX30Q5VWJ9 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SNX30Q5VWJ9 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.46□□□□□ -1.69
SNX30Q5VWJ9 PABPC1P7-201ENST00000413177 1513 ntBASIC4.46□□□□□ -1.69
SNX30Q5VWJ9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AL121657.1-201ENST00000327215 531 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 RNA5SP36-201ENST00000410197 133 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 MTND4P22-201ENST00000413116 1169 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 RPL23AP38-201ENST00000423801 469 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 USP9YP31-201ENST00000431405 881 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AC114755.5-201ENST00000447760 831 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 RPL7P22-201ENST00000466005 733 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AC139783.2-201ENST00000504847 1145 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 SNORA48.10-201ENST00000516965 160 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AC006064.5-201ENST00000541782 248 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 SULT1C2P1-202ENST00000562418 459 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 RN7SL600P-201ENST00000581811 299 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 YWHAQP7-201ENST00000603536 658 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AL139286.1-201ENST00000604465 483 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AL138721.1-201ENST00000616756 179 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AC022509.4-201ENST00000621404 572 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AC008013.2-202ENST00000637965 364 ntBASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX30Q5VWJ9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 AL022722.2-201ENST00000402519 180 ntBASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 RN7SKP182-201ENST00000410772 298 ntBASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 MIR1911-201ENST00000410783 80 ntBASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 ELOCP18-201ENST00000434209 337 ntBASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 NANOGP2-201ENST00000435391 727 ntBASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 MTCO1P48-201ENST00000448024 1096 ntBASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 RNA5SP246-201ENST00000458909 119 ntBASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 AC012170.1-201ENST00000495139 359 ntBASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 AC104164.2-201ENST00000496953 495 ntBASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 PTGES3P3-201ENST00000511479 482 ntBASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 AP000790.1-201ENST00000528891 737 ntBASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 AP000619.3-201ENST00000535634 1127 ntBASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 AC092470.1-201ENST00000546187 132 ntBASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.45□□□□□ -1.7
SNX30Q5VWJ9 SNORD39.3-201ENST00000584451 71 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms