Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 Y_RNA.5-201ENST00000362334 102 ntBASIC7.11□□□□□ -1.27
RC3H1Q5TC82 RNU6-238P-201ENST00000363313 106 ntBASIC7.11□□□□□ -1.27
RC3H1Q5TC82 RNU6-289P-201ENST00000364093 107 ntBASIC7.11□□□□□ -1.27
RC3H1Q5TC82 SNORA56-201ENST00000383966 129 ntBASIC7.11□□□□□ -1.27
RC3H1Q5TC82 RNU6-1013P-201ENST00000384180 107 ntBASIC7.11□□□□□ -1.27
RC3H1Q5TC82 SNORA67-201ENST00000384423 137 ntBASIC7.11□□□□□ -1.27
RC3H1Q5TC82 MIR548F5-201ENST00000408421 86 ntBASIC7.11□□□□□ -1.27
RC3H1Q5TC82 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 AC009965.2-201ENST00000425328 970 ntBASIC7.11□□□□□ -1.27
RC3H1Q5TC82 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 GPR143P-201ENST00000434155 205 ntBASIC7.11□□□□□ -1.27
RC3H1Q5TC82 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 PRPF38AP1-201ENST00000451976 933 ntBASIC7.11□□□□□ -1.27
RC3H1Q5TC82 PSMC1P13-201ENST00000458195 985 ntBASIC7.11□□□□□ -1.27
RC3H1Q5TC82 SLC25A51P1-201ENST00000468432 871 ntBASIC7.11□□□□□ -1.27
RC3H1Q5TC82 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 AC106872.2-201ENST00000494303 480 ntBASIC7.11□□□□□ -1.27
RC3H1Q5TC82 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 Y_RNA.665-201ENST00000516177 98 ntBASIC7.11□□□□□ -1.27
RC3H1Q5TC82 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 AC116158.1-201ENST00000560231 2129 ntBASIC7.11□□□□□ -1.27
RC3H1Q5TC82 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.11□□□□□ -1.27
RC3H1Q5TC82 OFD1P5Y-201ENST00000447585 2590 ntBASIC7.11□□□□□ -1.27
RC3H1Q5TC82 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AC005034.3-201ENST00000604845 1747 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 OLMALINC-203ENST00000641087 3779 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AC010329.1-201ENST00000593903 8328 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AC007114.2-201ENST00000576014 4281 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 MIR514A2-201ENST00000385131 88 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 MIR514A3-201ENST00000385132 88 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AL121835.1-201ENST00000404250 354 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 DUTP5-201ENST00000406790 469 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 U3.36-201ENST00000408418 213 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 RNU4-64P-201ENST00000410795 131 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AC116036.1-201ENST00000412199 367 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 HNRNPDLP1-201ENST00000412834 550 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AC019097.1-201ENST00000424783 735 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AC093655.2-201ENST00000425735 631 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 RPL23AP30-201ENST00000432419 501 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 RPL12P25-201ENST00000455592 494 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 RPL30P15-201ENST00000457129 321 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AC015911.1-201ENST00000495111 156 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AC110794.1-201ENST00000505816 425 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 RNU6-1143P-201ENST00000516125 104 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 NARSP2-201ENST00000518524 679 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 IGHVIII-76-1-201ENST00000523776 286 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 POLR2KP1-201ENST00000553226 168 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 OR4T1P-201ENST00000554933 911 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 MIR5690-201ENST00000583739 73 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AC016727.2-201ENST00000603988 621 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AL592436.1-201ENST00000605135 558 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AC067931.1-201ENST00000624190 671 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 PWAR1-201ENST00000624188 2414 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC7.1□□□□□ -1.27
RC3H1Q5TC82 AC140479.2-201ENST00000421567 3130 ntBASIC7.1□□□□□ -1.27
RC3H1Q5TC82 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.09□□□□□ -1.27
RC3H1Q5TC82 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.09□□□□□ -1.27
RC3H1Q5TC82 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms