Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIX1Q15475 MIR184-201ENST00000384962 84 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SIX1Q15475 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SIX1Q15475 MCTS2P-201ENST00000394552 546 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX1Q15475 AL590290.1-201ENST00000405336 380 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 PPIAP31-201ENST00000405422 495 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 AC017079.2-201ENST00000416102 485 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX1Q15475 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX1Q15475 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX1Q15475 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX1Q15475 MTCO2P17-201ENST00000424336 677 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIX1Q15475 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.76□□□□□ -1.81
SIX1Q15475 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.76□□□□□ -1.81
SIX1Q15475 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX1Q15475 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX1Q15475 AC007967.1-201ENST00000455422 1159 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 CDC42P1-201ENST00000456658 548 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.76□□□□□ -1.81
SIX1Q15475 RNU6-1218P-201ENST00000458990 108 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 RPL6P9-201ENST00000466502 859 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 AC104108.1-201ENST00000509930 412 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 ARL2BPP6-201ENST00000512757 439 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 AC119751.1-201ENST00000513357 765 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 PRELID3BP4-201ENST00000515476 571 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 RNU6-347P-201ENST00000516658 105 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 RNU6-579P-201ENST00000516879 102 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.76□□□□□ -1.81
SIX1Q15475 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.76□□□□□ -1.81
SIX1Q15475 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SIX1Q15475 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.76□□□□□ -1.81
SIX1Q15475 AL121766.1-201ENST00000547436 487 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.76□□□□□ -1.81
SIX1Q15475 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX1Q15475 HMGB3P26-201ENST00000560051 582 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 AC106785.1-201ENST00000565935 262 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 AC023824.3-201ENST00000569003 562 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX1Q15475 MIR1254-2-201ENST00000579553 63 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 MIR4425-201ENST00000580572 84 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 MIR4286-201ENST00000580651 93 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.76□□□□□ -1.81
SIX1Q15475 AL606490.9-201ENST00000603331 271 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 AL365503.1-201ENST00000605247 905 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 AL034351.1-201ENST00000605288 668 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.76□□□□□ -1.81
SIX1Q15475 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIX1Q15475 AC022149.2-201ENST00000621061 203 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 BX005019.1-201ENST00000561881 1810 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 CYP1D1P-201ENST00000416662 1433 ntBASIC3.76□□□□□ -1.81
SIX1Q15475 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.76□□□□□ -1.81
SIX1Q15475 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIX1Q15475 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SIX1Q15475 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SIX1Q15475 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SIX1Q15475 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SIX1Q15475 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SIX1Q15475 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SIX1Q15475 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.75□□□□□ -1.81
SIX1Q15475 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX1Q15475 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SIX1Q15475 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 RNU6-1339P-201ENST00000363574 91 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 RNA5SP235-201ENST00000365411 114 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 RNA5SP283-201ENST00000365604 119 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 MIR30B-201ENST00000384850 88 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 AC025750.1-201ENST00000399891 379 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 U3.39-201ENST00000408569 239 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 MTND4P22-201ENST00000413116 1169 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 TRGV6-201ENST00000417928 299 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX1Q15475 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX1Q15475 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 AL591419.1-201ENST00000427423 339 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SIX1Q15475 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX1Q15475 AL031663.1-201ENST00000437445 219 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 CDC27P1-201ENST00000445384 715 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 AL031313.1-201ENST00000448435 256 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.75□□□□□ -1.81
SIX1Q15475 RNU7-140P-201ENST00000459546 60 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 AC004801.2-202ENST00000463559 283 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.75□□□□□ -1.81
SIX1Q15475 AC093752.1-206ENST00000511823 336 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX1Q15475 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SIX1Q15475 NDUFB9P3-201ENST00000521269 501 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX1Q15475 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.75□□□□□ -1.81
SIX1Q15475 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX1Q15475 RPP40P2-201ENST00000603596 712 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 AL121594.5-201ENST00000631724 573 ntBASIC3.75□□□□□ -1.81
SIX1Q15475 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.75□□□□□ -1.81
SIX1Q15475 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.75□□□□□ -1.81
SIX1Q15475 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SIX1Q15475 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms