Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDH1Q08174 HMGB3P15-201ENST00000507326 574 ntBASIC5.7□□□□□ -1.5
PCDH1Q08174 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDH1Q08174 RNA5SP473-201ENST00000516402 125 ntBASIC5.7□□□□□ -1.5
PCDH1Q08174 RNU6-1046P-201ENST00000516538 107 ntBASIC5.7□□□□□ -1.5
PCDH1Q08174 MIR2117-201ENST00000516780 80 ntBASIC5.7□□□□□ -1.5
PCDH1Q08174 RN7SKP35-201ENST00000517210 151 ntBASIC5.7□□□□□ -1.5
PCDH1Q08174 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDH1Q08174 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDH1Q08174 MRPS16P1-201ENST00000523462 412 ntBASIC5.7□□□□□ -1.5
PCDH1Q08174 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDH1Q08174 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDH1Q08174 RPL21P12-201ENST00000559810 515 ntBASIC5.7□□□□□ -1.5
PCDH1Q08174 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDH1Q08174 AL627309.6-201ENST00000606857 840 ntBASIC5.7□□□□□ -1.5
PCDH1Q08174 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDH1Q08174 uc_338.26-201ENST00000612659 160 ntBASIC5.7□□□□□ -1.5
PCDH1Q08174 AC037198.3-201ENST00000616754 526 ntBASIC5.7□□□□□ -1.5
PCDH1Q08174 AL159972.1-201ENST00000625150 448 ntBASIC5.7□□□□□ -1.5
PCDH1Q08174 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDH1Q08174 AC130650.2-201ENST00000618736 2403 ntBASIC5.7□□□□□ -1.5
PCDH1Q08174 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDH1Q08174 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDH1Q08174 AC012618.3-205ENST00000637896 1496 ntBASIC5.7□□□□□ -1.5
PCDH1Q08174 AC011493.1-201ENST00000596753 1632 ntBASIC5.7□□□□□ -1.5
PCDH1Q08174 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDH1Q08174 AC004972.1-201ENST00000623934 2209 ntBASIC5.7□□□□□ -1.5
PCDH1Q08174 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDH1Q08174 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDH1Q08174 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDH1Q08174 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDH1Q08174 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDH1Q08174 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDH1Q08174 MTCO1P12-201ENST00000414273 1543 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDH1Q08174 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDH1Q08174 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDH1Q08174 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.69□□□□□ -1.5
PCDH1Q08174 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.69□□□□□ -1.5
PCDH1Q08174 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDH1Q08174 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDH1Q08174 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDH1Q08174 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.69□□□□□ -1.5
PCDH1Q08174 OR1S2-201ENST00000302592 978 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 RNU4-66P-201ENST00000365199 138 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 Y_RNA.373-201ENST00000365600 103 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.69□□□□□ -1.5
PCDH1Q08174 RNU6-639P-201ENST00000384074 107 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 RNU6-38P-201ENST00000384085 107 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 MIR130B-202ENST00000385018 82 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 MIR454-201ENST00000390180 115 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PCDH1Q08174 RNY4P36-201ENST00000391116 96 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDH1Q08174 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDH1Q08174 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDH1Q08174 RPL12P11-201ENST00000439970 501 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDH1Q08174 AC022431.1-201ENST00000450941 438 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 RNU6-333P-201ENST00000459117 107 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 RPS4XP10-201ENST00000465034 731 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 AL049714.1-201ENST00000466686 347 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 VN1R17P-201ENST00000472048 1090 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 AC012181.1-201ENST00000479895 423 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 ATP5LP5-201ENST00000483050 299 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 LSM3P4-201ENST00000502948 309 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 AC091885.1-201ENST00000506658 268 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDH1Q08174 RN7SKP219-201ENST00000516825 296 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDH1Q08174 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.69□□□□□ -1.5
PCDH1Q08174 AC136777.2-201ENST00000522979 358 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDH1Q08174 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDH1Q08174 AC002310.3-201ENST00000569728 723 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 AC090615.1-201ENST00000577519 154 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 AL512782.1-201ENST00000603093 364 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 AL121992.2-201ENST00000606262 256 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 RNA5SP439-201ENST00000617595 124 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 AC245014.3-201ENST00000618589 347 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 7SK.10-201ENST00000621414 298 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDH1Q08174 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDH1Q08174 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDH1Q08174 AC104966.1-201ENST00000467010 1464 ntBASIC5.69□□□□□ -1.5
PCDH1Q08174 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PCDH1Q08174 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDH1Q08174 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDH1Q08174 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDH1Q08174 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDH1Q08174 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
PCDH1Q08174 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDH1Q08174 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDH1Q08174 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDH1Q08174 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDH1Q08174 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PCDH1Q08174 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDH1Q08174 Y_RNA.22-201ENST00000362492 102 ntBASIC5.68□□□□□ -1.5
PCDH1Q08174 RNA5SP258-201ENST00000362750 119 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms