Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 VDAC1P3-201ENST00000434069 851 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.83□□□□□ -1.8
SCN1BQ07699 RPL23AP93-201ENST00000440847 484 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.83□□□□□ -1.8
SCN1BQ07699 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.83□□□□□ -1.8
SCN1BQ07699 TMED11P-201ENST00000479478 690 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SCN1BQ07699 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.83□□□□□ -1.8
SCN1BQ07699 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.83□□□□□ -1.8
SCN1BQ07699 OR7H2P-201ENST00000513483 306 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 RNU6-27P-201ENST00000516146 107 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 RNU6-1225P-201ENST00000516336 65 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 RN7SKP289-201ENST00000517244 295 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.83□□□□□ -1.8
SCN1BQ07699 AC008802.1-201ENST00000519121 791 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 MED28P5-201ENST00000528254 438 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.83□□□□□ -1.8
SCN1BQ07699 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.83□□□□□ -1.8
SCN1BQ07699 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.83□□□□□ -1.8
SCN1BQ07699 MTCYBP23-201ENST00000558717 1102 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.83□□□□□ -1.8
SCN1BQ07699 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SCN1BQ07699 AL133457.1-201ENST00000564251 987 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 MIR3690-201ENST00000580266 75 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 AC091057.3-201ENST00000602684 733 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 AP003392.5-201ENST00000607857 415 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 AL590282.1-201ENST00000610379 1136 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 AC023158.2-201ENST00000614876 543 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.83□□□□□ -1.8
SCN1BQ07699 MIR6719-201ENST00000622428 87 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.83□□□□□ -1.8
SCN1BQ07699 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCN1BQ07699 MTND4P10-201ENST00000446199 1363 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCN1BQ07699 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCN1BQ07699 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCN1BQ07699 EXOC5P1-201ENST00000510543 1969 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.83□□□□□ -1.8
SCN1BQ07699 AC008725.1-201ENST00000605123 2263 ntBASIC3.83□□□□□ -1.8
SCN1BQ07699 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCN1BQ07699 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.83□□□□□ -1.8
SCN1BQ07699 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.83□□□□□ -1.8
SCN1BQ07699 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SCN1BQ07699 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.83□□□□□ -1.8
SCN1BQ07699 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SCN1BQ07699 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.82□□□□□ -1.8
SCN1BQ07699 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SCN1BQ07699 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SCN1BQ07699 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.82□□□□□ -1.8
SCN1BQ07699 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.82□□□□□ -1.8
SCN1BQ07699 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.82□□□□□ -1.8
SCN1BQ07699 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SCN1BQ07699 AC008033.1-201ENST00000216407 1162 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SCN1BQ07699 MIR506-201ENST00000384998 124 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 ZNF602P-201ENST00000405929 924 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 AL450338.1-201ENST00000407987 512 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 CRYBB2P1-203ENST00000415709 538 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.82□□□□□ -1.8
SCN1BQ07699 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.82□□□□□ -1.8
SCN1BQ07699 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.82□□□□□ -1.8
SCN1BQ07699 EXOSC3P1-201ENST00000448649 500 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 AC012671.1-201ENST00000451912 203 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 RPS24P6-201ENST00000452670 400 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 HIGD1AP8-201ENST00000453927 274 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 RFC5P1-201ENST00000454419 874 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 RPS27AP17-201ENST00000463344 455 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 RN7SL329P-201ENST00000467740 299 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 VN1R17P-201ENST00000472048 1090 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.82□□□□□ -1.8
SCN1BQ07699 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.82□□□□□ -1.8
SCN1BQ07699 NDUFA5P12-201ENST00000503796 343 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.82□□□□□ -1.8
SCN1BQ07699 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SCN1BQ07699 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.82□□□□□ -1.8
SCN1BQ07699 RNA5SP143-201ENST00000516936 115 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SCN1BQ07699 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.82□□□□□ -1.8
SCN1BQ07699 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.82□□□□□ -1.8
SCN1BQ07699 AC126177.3-201ENST00000551839 688 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.82□□□□□ -1.8
SCN1BQ07699 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.82□□□□□ -1.8
SCN1BQ07699 UBE2FP2-201ENST00000566646 462 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 AC091042.1-201ENST00000579213 173 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.82□□□□□ -1.8
SCN1BQ07699 CYCSP41-201ENST00000616920 296 ntBASIC3.82□□□□□ -1.8
SCN1BQ07699 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.82□□□□□ -1.8
SCN1BQ07699 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SCN1BQ07699 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.82□□□□□ -1.8
SCN1BQ07699 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SCN1BQ07699 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SCN1BQ07699 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.81□□□□□ -1.8
SCN1BQ07699 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.81□□□□□ -1.8
SCN1BQ07699 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SCN1BQ07699 CPHL1P-201ENST00000461341 3407 ntBASIC3.81□□□□□ -1.8
SCN1BQ07699 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SCN1BQ07699 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SCN1BQ07699 AF127577.6-201ENST00000623352 2191 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms