Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SNORA31.26-201ENST00000517250 137 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 RANP9-201ENST00000519957 271 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 MED28P5-201ENST00000528254 438 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 VN1R85P-201ENST00000601587 426 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AC010591.1-201ENST00000603941 649 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 RNU1-30P-201ENST00000606575 163 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AL590240.3-201ENST00000621416 943 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AC092435.3-201ENST00000565538 3654 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AC017071.1-201ENST00000564407 2204 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HIST1H1AQ02539 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.62□□□□□ -1.99
HIST1H1AQ02539 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.62□□□□□ -1.99
HIST1H1AQ02539 SNORD9-201ENST00000362566 104 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 SNORA51.4-201ENST00000364993 124 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 AC007066.1-201ENST00000392902 381 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 RN7SKP53-201ENST00000411337 315 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 AL035423.1-201ENST00000420331 213 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 AC093151.1-201ENST00000427711 313 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 AC091959.2-201ENST00000477363 321 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 RN7SKP18-201ENST00000516005 275 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 AC007991.1-201ENST00000522680 631 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 AC007536.1-201ENST00000533382 349 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.62□□□□□ -1.99
HIST1H1AQ02539 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.62□□□□□ -1.99
HIST1H1AQ02539 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.62□□□□□ -1.99
HIST1H1AQ02539 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.62□□□□□ -1.99
HIST1H1AQ02539 AC006116.10-201ENST00000591836 581 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.62□□□□□ -1.99
HIST1H1AQ02539 AL109653.1-201ENST00000603091 248 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 AL451086.1-201ENST00000605596 223 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 AL391834.1-201ENST00000609609 560 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 AC092159.4-201ENST00000624944 550 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 CR392039.4-201ENST00000624968 501 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HIST1H1AQ02539 AC026951.1-201ENST00000559530 2459 ntBASIC2.62□□□□□ -1.99
HIST1H1AQ02539 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HIST1H1AQ02539 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HIST1H1AQ02539 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HIST1H1AQ02539 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 RNA5SP51-201ENST00000364750 119 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 U8.11-201ENST00000384699 133 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 U8.12-201ENST00000384701 133 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AL354719.1-201ENST00000406535 843 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 ATP5A1P2-201ENST00000412323 255 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AC007899.1-201ENST00000412776 775 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 CASKP1-201ENST00000412870 582 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 RPL7P52-201ENST00000449200 742 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 NF1P3-201ENST00000457709 450 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 U8.18-201ENST00000459285 133 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AC103987.1-201ENST00000473394 348 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 CDH12P2-201ENST00000504393 298 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AC110792.2-201ENST00000510278 224 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AC093755.1-201ENST00000512950 1023 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 SNORA70.18-201ENST00000516696 98 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 MIR4697-201ENST00000582977 78 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 YWHAQP7-201ENST00000603536 658 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AC005972.3-201ENST00000606304 481 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AC024941.1-201ENST00000612250 334 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AC119674.1-212ENST00000641155 993 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 MTCO1P8-201ENST00000416914 1523 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AL353743.4-201ENST00000422653 1547 ntBASIC2.61□□□□□ -1.99
HIST1H1AQ02539 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HIST1H1AQ02539 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HIST1H1AQ02539 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms